DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtsL4 and F26E4.3

DIOPT Version :10

Sequence 1:NP_609387.1 Gene:CtsL4 / 34401 FlyBaseID:FBgn0032228 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_492593.2 Gene:F26E4.3 / 172827 WormBaseID:WBGene00009158 Length:452 Species:Caenorhabditis elegans


Alignment Length:384 Identity:101/384 - (26%)
Similarity:157/384 - (40%) Gaps:75/384 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 CLCGLNCQIVTSNLSEGNSSSANCKSEFE---KFKNNNNRKYLRTYDEMRSYKAFEENFKVIEEH 70
            |.|.:.|       ..|.....:|..:||   :.|:..|.:.:............|:|.:....|
 Worm    56 CYCDMFC-------DRGPDGGNDCCPDFEATCRGKDIQNDQRIDGESCSMDGDTKEKNCEKCTCH 113

  Fly    71 NQNYKEGQTSFRLKPNIFADMSTDGY------LKGFL-RLLKSNI---------EDSADNMAEIV 119
            |..:|...|:..::|:|...:.|..|      ...|. |.|...|         |.|..||.||:
 Worm   114 NGFWKCDGTACLIQPDILEKIHTGRYSWSARNYSAFWGRSLSDGIKYRLGTLFPERSVQNMNEIL 178

  Fly   120 GSPLMANVPESLDWRSK--GFITPPYNQLSCGSCYAFS---IAESIMGQVFKRTGKILS-LSKQQ 178
            ..|  ..:||..|.|.|  ..|.|..:|..|||.::.|   |:...:..:.:  |:|.| ||.||
 Worm   179 IKP--RELPEHFDARDKWGPLIHPVADQGDCGSSWSVSTTAISSDRLAIISE--GRINSTLSSQQ 239

  Fly   179 IVDCSVSHGNQGCVGGSLRNTLSYLQSTGGIMRDQDYPYVA----RKGKCQFVPDLSVVN----- 234
            ::.|: .|..:||.||.|.....|::.. |::.|..||||:    ..|.| .:|.....|     
 Worm   240 LLSCN-QHRQKGCEGGYLDRAWWYIRKL-GVVGDHCYPYVSGQSREPGHC-LIPKRDYTNRQGLR 301

  Fly   235 -------VTSWAILP----VRDEQAIQAAVTHIGPVAISINASPKTFQLYSDGIYDDP------- 281
                   .|::.:.|    ...|:.||..:...|||..:. ...:.|.:|:.|:|...       
 Worm   302 CPSGSQDSTAFKMTPPYKVSSREEDIQTELMTNGPVQATF-VVHEDFFMYAGGVYQHSDLAAQKG 365

  Fly   282 LCSSASVNHAMVVIGFGKD--------YWILKNWWGQNWGENGYIRIRKGVNMCGIANY 332
            ..|.|...|::.|:|:|.|        ||:..|.||..|||:||.::.:|.|.|.|.::
 Worm   366 ASSVAEGYHSVRVLGWGVDHSTGKPIKYWLCANSWGTQWGEDGYFKVLRGENHCEIESF 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsL4NP_609387.1 Inhibitor_I29 36..96 CDD:462410 13/62 (21%)
Peptidase_C1A 128..336 CDD:239068 71/246 (29%)
F26E4.3NP_492593.2 Somatomedin_B 37..83 CDD:460034 7/33 (21%)
Peptidase_C1A_CathepsinB 185..428 CDD:239111 71/246 (29%)

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