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Protein Alignment CtsL4 and ctsf

DIOPT Version :10

Sequence 1:	NP_609387.1	Gene:	CtsL4 / 34401	FlyBaseID:	FBgn0032228	Length:	338	Species:	Drosophila melanogaster
Sequence 2:	NP_001106423.1	Gene:	ctsf / 100127591	XenbaseID:	XB-GENE-5876529	Length:	463	Species:	Xenopus tropicalis

Alignment Length:	361	Identity:	109/361 - (30%)
Similarity:	168/361 - (46%)	Gaps:	59/361 - (16%)

- Green bases have known domain annotations that are detailed below.

  Fly    10 LCGLNCQIV----TSNLSEGNSSSANCKSE-------FEKFKNNNNRKYLRTYDEMRSYKAFEEN 63
            ||.....||    |....:.|..|:..:.|       |:.|....|:||....:..|..:.|.:|
Frog   129 LCSQEIFIVELTDTETSQKQNVPSSELEDEMLKTLTLFKDFVTTYNKKYSDQEEAARRLQIFSQN 193

  Fly    64 FK---VIEEHNQNYKE-GQTSFRLKPNIFADMSTDGYLKGFLRLLKSNIEDSADNMAEIVGSPLM 124
            .|   :|:|.:|...| |.|.       ::|::.|.:...:|..|.|:             .||.
Frog   194 LKKAQMIQEMDQGTAEYGVTK-------YSDLTEDEFRSLYLNPLLSS-------------KPLY 238

  Fly   125 ---------ANVPESLDWRSKGFITPPYNQLSCGSCYAFSIAESIMGQVFKRTGKILSLSKQQIV 180
                     .:.|:..|||..|.:|...||..||||:|||:..:|.||.|.:.|.::|||:|::|
Frog   239 QMKKAIVPNMSAPDQWDWRDHGAVTEVKNQGMCGSCWAFSVIGNIEGQWFLKKGSLVSLSEQELV 303

  Fly   181 DC-SVSHGNQGCVGGSLRNTLSYLQSTGGIMRDQDYPYVARKGKCQFVPDLSVVNVTSWAILPVR 244
            || .|.|   .|.||...|....::..|||..:|:|.|...|..|.|........:.|...:| :
Frog   304 DCDGVDH---ACAGGLPSNAYEAIEKLGGIETEQEYSYEGHKNTCSFSTSKVSAYINSSVEIP-K 364

  Fly   245 DEQAIQAAVTHIGPVAISINASPKTFQLYSDGIYDDP---LCSSASVNHAMVVIGFGK----DYW 302
            ||..|.|.:...||::|::||.  ..|.|..|| ..|   ||:...::||::::|:|:    .:|
Frog   365 DENEIAAWLAQNGPISIALNAF--AMQFYRKGI-SHPFRILCNPWMIDHAVLLVGYGERNGTPFW 426

  Fly   303 ILKNWWGQNWGENGYIRIRKGVNMCGIANYAAYAIV 338
            .:||.||.:|||.||..:.:|...||:....:.|:|
Frog   427 AIKNSWGTDWGEQGYYYLYRGTGACGMNTMCSSAVV 462

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.