DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5022 and frmd5b

DIOPT Version :9

Sequence 1:NP_609384.1 Gene:CG5022 / 34398 FlyBaseID:FBgn0032225 Length:572 Species:Drosophila melanogaster
Sequence 2:XP_021333528.1 Gene:frmd5b / 569968 ZFINID:ZDB-GENE-060810-165 Length:571 Species:Danio rerio


Alignment Length:613 Identity:186/613 - (30%)
Similarity:275/613 - (44%) Gaps:125/613 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 YKCTVRLLDDSDVLECEFQPFHKGIYLLEYLCGELEIKEKDYFGLRYVDSSKQRHWLDLSKSIIK 76
            :.|||||||||: ..|..|...||.:|.|.:|..|.:.||||||:|:||..||||||:.||.|.|
Zfish    17 FNCTVRLLDDSE-YTCTVQRDAKGHWLFEQVCQHLNLLEKDYFGIRFVDPDKQRHWLEFSKPITK 80

  Fly    77 QCKEMDPLLFSLRVKFYPADPFRLTGN-ARIMLYQQLKRDLRHGRLYCSLGEAAALGALIVQEEL 140
            |.:...|....|||||||.||..|... .|.:|:.|:||||.||||.|...:||.|.|.|:|.|:
Zfish    81 QMRSQPPYTMCLRVKFYPPDPAALKEEITRYLLFLQIKRDLYHGRLLCKSSDAATLAAFILQAEI 145

  Fly   141 GDYNEDVHVGSYVSSIELALRQTECLEKKIIELHKKREPGQNLSLAMDEFLGIARGLETYGIDPH 205
            |||:...|...|.|..:...:.:|.||::|.|:||....||:...:...||..|:.|||||:|||
Zfish   146 GDYDPGKHPEGYSSKFQFFPKHSERLERRIAEIHKSELTGQSPETSELNFLRKAQTLETYGVDPH 210

  Fly   206 PVKDHRGSQQYVGINNTGISTFVAGKRSQHFRWNEIHKINFEGKMFIAHLSYTDASREPKKHTVG 270
            |.||..|:..::.....|.......:|....:|||:.|:.||.|.|  |:..|  .:|.:|..:.
Zfish   211 PCKDVSGNTAFLAFTPFGFVVLQGNRRIHFLKWNEVTKLKFEAKTF--HIYAT--HQEDQKIILT 271

  Fly   271 FKCPTGAACRYLWRCAIEQMLFFTLPNSQSAAVISGGGFFSWGTKFRYTGRTEREILTENINALR 335
            :..||..||::||:|.:|...|:....|.....:|....|..|::|||:|:..:|::.::....|
Zfish   272 YFAPTPEACKHLWKCGVENQAFYQFEKSSQVRTVSSSNLFFKGSRFRYSGKVAKEVMEQSAKIRR 336

  Fly   336 EQKNNSNSSKRKASSVPATPSSPQGDLAQIRYSSLPRSTMSEPLGYGMPNGHFYGHDHGMSDANG 400
            |......:....:.|.|:....|       |.||:||:                        ...
Zfish   337 EPPEIHRAGMVPSRSCPSITHGP-------RQSSVPRT------------------------RRR 370

  Fly   401 GIQISSLEPVCEEARLRSSNIDGVNYLASQIGGYAYRDSVEHSSTESGLTVNGYDHPRKHNEARQ 465
            .:.||.:|                       |..:.||| .||:....:: |.....|......:
Zfish   371 AVHISIME-----------------------GLESLRDS-GHSTPVRSVS-NSNSFLRSQGNGAE 410

  Fly   466 HGSYSPNLYYGQSDGAVNSSSPADSFLHA----DPS----------TRKVK-------------- 502
            .||       |.::.:.:|.||:||.|..    |||          .|.::              
Zfish   411 GGS-------GTAEFSEDSYSPSDSVLPTPVSNDPSDPAQVRHTNGPRNIQEEGGTEQCSQNQAR 468

  Fly   503 ------KFRKFHL-------------LHAFVPS-----VIFVAFAMAGTAVFIMESESE---AF- 539
                  |.::.||             ::.|:.|     ::.||...|...:.|:.:|||   || 
Zfish   469 PQGVKPKGKRSHLEKSRPTQHSPEEGVNQFICSLARLFLVTVALLFALLLLLIVLTESELDLAFL 533

  Fly   540 EQLRNSPEMLCLRYQYYQPLKEFVLEKL 567
            ..:|.:||.....|:|:.||:.::..||
Zfish   534 RDIRRTPEFQQFHYEYFCPLRRWLACKL 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5022NP_609384.1 B41 13..205 CDD:214604 91/192 (47%)
FERM_N 16..80 CDD:286467 35/63 (56%)
FERM_M 108..205 CDD:278785 42/96 (44%)
FERM_C_FRMD3_FRMD5 186..294 CDD:270013 38/107 (36%)
FA 308..349 CDD:285894 9/40 (23%)
frmd5bXP_021333528.1 B41 19..210 CDD:214604 91/191 (48%)
PH-like 191..294 CDD:327399 37/106 (35%)
FA 309..>343 CDD:312314 9/33 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586154
Domainoid 1 1.000 77 1.000 Domainoid score I8774
eggNOG 1 0.900 - - E1_KOG3530
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 270 1.000 Inparanoid score I2984
OMA 1 1.010 - - QHG47808
OrthoDB 1 1.010 - - D227685at33208
OrthoFinder 1 1.000 - - FOG0002996
OrthoInspector 1 1.000 - - otm25643
orthoMCL 1 0.900 - - OOG6_105621
Panther 1 1.100 - - O PTHR23280
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1988
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.810

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