DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5022 and cora

DIOPT Version :9

Sequence 1:NP_609384.1 Gene:CG5022 / 34398 FlyBaseID:FBgn0032225 Length:572 Species:Drosophila melanogaster
Sequence 2:NP_523791.2 Gene:cora / 37205 FlyBaseID:FBgn0010434 Length:1698 Species:Drosophila melanogaster


Alignment Length:587 Identity:155/587 - (26%)
Similarity:236/587 - (40%) Gaps:137/587 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 VRLLDDSDVLECEFQPFHKGIYLLEYLCGELEIKEKDYFGLRYVDSSKQRHWLDLSKSIIKQCK- 79
            |.|||.| :|:........|..::..:|..|.:.|||||||.|...:..|.||||.|.:.|..: 
  Fly    36 VTLLDGS-LLDVSIDRKAIGRDVINSICAGLNLIEKDYFGLTYETPTDPRTWLDLEKPVSKFFRT 99

  Fly    80 EMDPLLFSLRVKFYPADPFRLTGN-ARIMLYQQLKRDLRHGRLYCSLGEAAALGALIVQEELGDY 143
            :..||.|:  |||||.:|.:|..: .|..|..|::.|:..|||.|:....|.||:.:||.|:|||
  Fly   100 DTWPLTFA--VKFYPPEPSQLKEDITRYHLCLQVRNDILEGRLPCTFVTHALLGSYLVQSEMGDY 162

  Fly   144 N-EDVHVGSYVSSIELALRQTECLEKKIIELHKKREPGQNLSLAMDEFLGIARGLETYGIDPHPV 207
            : |::...:|:...::|..||..||.|:::|||..: ||:.:.|...:|..|:.|..||:|.||.
  Fly   163 DAEEMPTRAYLKDFKIAPNQTAELEDKVMDLHKTHK-GQSPAEAELHYLENAKKLAMYGVDLHPA 226

  Fly   208 KDHRGSQQYVGINNTGISTFVAGKRSQHFRWNEIHKINFEGKMFIAHLSYTDASREPKKHTVGFK 272
            ||..|....:|:..:|:..:....|...|.|.:|.||:::...|  ::.......|..:.|:|||
  Fly   227 KDSEGVDIMLGVCASGLLVYRDKLRINRFAWPKILKISYKRHHF--YIKIRPGEFEQYESTIGFK 289

  Fly   273 CPTGAACRYLWRCAIEQMLFFTL----PNSQSAAVISGGGFFSWGTKFRYTGRTEREILTENINA 333
            .....|.:.||:..:|...||.|    |.|:|..      |..:|:.:||.|||:.|.....::.
  Fly   290 LANHRAAKKLWKSCVEHHTFFRL
MTPEPVSKSKM------FPVFGSTYRYKGRTQAESTNTPVDR 348

  Fly   334 LREQKNNSNSSKRKAS-SVPATPSSPQGDLAQIRYSSLPRSTMSEPLGYGMPNGHFYGHDHGMSD 397
            ...:.|.:.|..|..| |:.|..      ||:....:...||:                || ..|
  Fly   349 TPPKFNRTLSGARLTSRSMDALA------LAEKEKVARKSSTL----------------DH-RGD 390

  Fly   398 ANGGIQISSLEPV--------CEEARLR------------------------------------- 417
            .|......|..|:        .:||:||                                     
  Fly   391 RNADGDAHSRSPIKNKKEKDADKEAKLREKKQKEKEEKERKEREKRELEEKKKAEKAAKAALAAG 455

  Fly   418 ---------------------SSNIDGVNYLAS---QIGGYAYRDSVEHSSTE------------ 446
                                 ||...||...:|   ...|...:|..:.|..:            
  Fly   456 AAAGAAVNGNDELNDSNKSDKSSGRRGVGIFSSGRKSKSGSPSKDGKDKSGKDKDKEVGRLGLVV 520

  Fly   447 -SGLTVNGYDH---PRKHNEARQHGSYSPNL-----YYGQSDGAVN----SSSPADSFLHADPST 498
             |||..|..|.   ....|.|:..||.:|.:     |...:||..:    |.:|.......||::
  Fly   521 TSGLGDNQQDQNLDEAARNAAKNRGSTTPGVTRQYEYAVDNDGNTSPTRKSYTPGGFRYDQDPNS 585

  Fly   499 RK 500
            ||
  Fly   586 RK 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5022NP_609384.1 B41 13..205 CDD:214604 71/191 (37%)
FERM_N 16..80 CDD:286467 24/64 (38%)
FERM_M 108..205 CDD:278785 36/97 (37%)
FERM_C_FRMD3_FRMD5 186..294 CDD:270013 31/107 (29%)
FA 308..349 CDD:285894 11/40 (28%)
coraNP_523791.2 B41 34..224 CDD:214604 71/191 (37%)
FERM_N 36..98 CDD:286467 24/62 (39%)
FERM_M 116..224 CDD:278785 38/108 (35%)
FERM_C_4_1_family 219..312 CDD:270005 28/94 (30%)
FA 323..363 CDD:285894 11/45 (24%)
PQQ_2 829..>972 CDD:290097
4_1_CTD 1612..1698 CDD:283537
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455762
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3530
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23280
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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