DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5022 and Frmd6

DIOPT Version :9

Sequence 1:NP_609384.1 Gene:CG5022 / 34398 FlyBaseID:FBgn0032225 Length:572 Species:Drosophila melanogaster
Sequence 2:NP_082403.2 Gene:Frmd6 / 319710 MGIID:2442579 Length:622 Species:Mus musculus


Alignment Length:502 Identity:107/502 - (21%)
Similarity:184/502 - (36%) Gaps:127/502 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 CEFQPFHKGI-----------YLLEYLCGELEIKEKDYFGLRYVDSSKQRHWLDLSKSIIKQC-- 78
            |.|.|..|.:           .||..:|..|.:|:...|||..:.:: :..:::||:.:.|.|  
Mouse    19 CIFLPNDKSVSIIINVKILCHQLLVQVCDLLRLKDSHLFGLSVIQNN-EHVYMELSQKLYKYCPK 82

  Fly    79 ---KEMD----------------PLLFSLRVKFYPADPFRLTGN-ARIMLYQQLKRDLRHGRLYC 123
               ||..                |::...||::|..:...::.. ||...|..|::.:.|.:  |
Mouse    83 EWKKEASKVRQYEVTWGIDQFGPPMIIHFRVQYYVENGKLISDRIARYYYYWHLRKQVLHSQ--C 145

  Fly   124 SLGEAA--ALGALIVQEELGDYNEDVHVG------SYVSSIELALRQTECLEKKIIELHKKREPG 180
            .|.|.|  .|.|..:|.:||::...:|.|      :|..:..::.|..:.:.|.|..:||     
Mouse   146 VLREEAYFLLAAFALQADLGNFKRKLHHGDYFEPEAYFPAWVVSKRGKDYILKHIPNMHK----- 205

  Fly   181 QNLSLAMDE----FLGIARGLETYGIDPHPV-KDHRGSQ--QYVGINNTGISTFVAGKRSQH--- 235
            ...:|...|    ::..|..|:...|..:.: ||.|.::  ..:|:...||..|...:..:.   
Mouse   206 DQFALTASEAYLKYIKEAVRLDDVAIHYYRLYKDKREAEGSLTLGLTMRGIQIFQNLEEEKQLLY 270

  Fly   236 -FRWNEIHKINFEGKMFIAHLSYTDASREPKKHTVGFKCPTGAACRYLWRCAIEQMLFFTLPNSQ 299
             |.|..:.|:.|.||.|..   ..|.....:|......|||.:  |:|.:         .|.||.
Mouse   271 DFPWTNVGKLVFVGKKFEI---LPDGLPSARKLVYYTGCPTRS--RHLLQ---------LLSNSH 321

  Fly   300 SAAVISGGGFFSWGTKFRYTGRTE--------RE-ILTENI----NALREQKNNSNSS----KRK 347
            ..       :.:.....|:..:.|        || .:::|:    :.|.::...|.||    |.|
Mouse   322 RL-------YMNLQPVLRHLRKQEENEEKKQYRESYISDNLDLDMDPLEKRSRASGSSAGSVKHK 379

  Fly   348 ASSVPATPSSPQGDLAQIRYSSLPRSTMSEPLGYGMPNGHFYGHDHGMSDANGGIQISSLEPVCE 412
            ..|..:|.|......:.|...:.||                   |.|..|:..|..:......|.
Mouse   380 RLSRHSTASHSSSHTSGIEADTKPR-------------------DPGPEDSCSGSAMHRKLKTCS 425

  Fly   413 EARLR-SSNIDGVNYLASQIGGYAYRDSVEHSSTESGLTVNGYDHPR 458
            ..... ||:..||     :.||   :|.:|..|.:..:.:. .|.||
Mouse   426 SMTSHGSSHTSGV-----ESGG---KDRLEEDSQDEEIEML-VDDPR 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5022NP_609384.1 B41 13..205 CDD:214604 49/222 (22%)
FERM_N 16..80 CDD:286467 16/68 (24%)
FERM_M 108..205 CDD:278785 25/108 (23%)
FERM_C_FRMD3_FRMD5 186..294 CDD:270013 25/118 (21%)
FA 308..349 CDD:285894 11/57 (19%)
Frmd6NP_082403.2 Ubiquitin_like_fold 15..120 CDD:421700 22/101 (22%)
FERM_M 123..234 CDD:395297 27/117 (23%)
FERM_C_FRMD1_FRMD6 227..335 CDD:270006 26/128 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 357..452 26/121 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841768
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.