DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5022 and Epb41l4a

DIOPT Version :9

Sequence 1:NP_609384.1 Gene:CG5022 / 34398 FlyBaseID:FBgn0032225 Length:572 Species:Drosophila melanogaster
Sequence 2:XP_006254645.1 Gene:Epb41l4a / 307514 RGDID:1306034 Length:688 Species:Rattus norvegicus


Alignment Length:530 Identity:143/530 - (26%)
Similarity:230/530 - (43%) Gaps:77/530 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 YKCTVRLLDDSDV-LECEFQPFH---KGIYLLEYLCGELEIKEKDYFGLRYVDSSKQRHWLDLSK 72
            :.|.|.|||:|.: |..:.|...   ||..:|:::...:.:.|.|||||||.|.|.|.:|||.:|
  Rat    11 FYCEVLLLDESKLTLTTQHQGIKKSTKGSVVLDHVFRHVNLVEIDYFGLRYCDRSHQTYWLDPAK 75

  Fly    73 SIIKQCKEM----DPLLFSLRVKFYPADPFRLTGN-ARIMLYQQLKRDLRHGRLYCSLGEAAALG 132
            ::.:. ||:    .|......:|||..||.:|... .|...:.|:|:|...|||.|.:..||.||
  Rat    76 TLAEH-KELINTGPPYTLYFGIKFYAEDPCKLKEEITRYQFFLQVKQDALQGRLPCPVNIAAQLG 139

  Fly   133 ALIVQEELGDYNEDVHVGSYVSSIELALRQTECLEKKIIELHKKREPGQNLSLAMDEFLGIARGL 197
            |..:|.||||::...|...|||.......|.|.||:.|..:||.. .||..|.|...:|..|:.|
  Rat   140 AYAIQAELGDHDPCKHTAGYVSEYRFVPDQKEELEESIERIHKTL-MGQAPSEAELNYLRTAKSL 203

  Fly   198 ETYGIDPHPVKDHRGSQQYVGINNTGISTFVAGKRSQHFRWNEIHKINFEGKMFIAHLSYTDASR 262
            |.||:|.|||.....|:.::|:...|:..:...|:...:.|..|.|::|:...|...:...|.: 
  Rat   204 EMYGVDLHPVYGENKSEYFLGLTPVGVVVYKNKKQVGKYFWPRITKVHFKETQFELRVLGKDCN- 267

  Fly   263 EPKKHTVGFKCPTGAACRYLWRCAIEQMLFFTLPNSQSAAV---ISGGGFFSWGTKFRYTGRTER 324
               :.:..|:..:..||::||:|::|...||.:|.::|.::   :|..|..|:  |.||:|||..
  Rat   268 ---ETSFFFEARSKTACKHLWKCSVEHHTFFRMPETESNSLSRKLSKFGSISY--KHRYSGRTAL 327

  Fly   325 EILTENINALREQKNNSNSSKRKASSVPATPSSPQGDLAQIRYSSLPRSTMSEPLGYGMPNGHFY 389
            ::..:....|.....|...|:.|........:.|.|.      :|:.|.|.:      :.||   
  Rat   328 QMSRDLSIQLPRPNQNVVRSRSKTYPKRVAQTQPAGS------NSINRMTAN------LENG--- 377

  Fly   390 GHDHGMSDANGGIQISSLEPVCEEARLRSSNIDGVNYLASQIGGYAYRDSVEHSSTESGL----- 449
                   :..|..:|.:..||....:.::.|........|..       ..|.:..:|||     
  Rat   378 -------ENEGTTKIIAPSPVKSFKKAKNENSPDPQRSKSHA-------PWEENGPQSGLYNSPS 428

  Fly   450 -------------------TVNGYDHPRKHNEARQHGSYSPNLYYGQSDGAVNSSSPADSFLHAD 495
                               :.|....|.:..:|...|..|......:|....|:||.::|    :
  Rat   429 DRTKSPKFPCTRQRNLSCGSDNDSSQPMRRRKAHHSGEDSDLKQRRRSRSRCNTSSGSES----E 489

  Fly   496 PSTRKVKKFR 505
            .|.|:.:|.|
  Rat   490 NSNREHRKKR 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5022NP_609384.1 B41 13..205 CDD:214604 75/200 (38%)
FERM_N 16..80 CDD:286467 25/67 (37%)
FERM_M 108..205 CDD:278785 39/96 (41%)
FERM_C_FRMD3_FRMD5 186..294 CDD:270013 29/107 (27%)
FA 308..349 CDD:285894 12/40 (30%)
Epb41l4aXP_006254645.1 B41 13..211 CDD:214604 75/199 (38%)
FERM_N 15..80 CDD:286467 25/64 (39%)
FERM_M 105..211 CDD:278785 41/106 (39%)
FERM_C_NBL4_NBL5 207..296 CDD:270007 23/92 (25%)
FA 311..354 CDD:285894 12/44 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345138
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
43.790

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