DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5022 and Frmd3

DIOPT Version :9

Sequence 1:NP_609384.1 Gene:CG5022 / 34398 FlyBaseID:FBgn0032225 Length:572 Species:Drosophila melanogaster
Sequence 2:NP_766457.1 Gene:Frmd3 / 242506 MGIID:2442466 Length:595 Species:Mus musculus


Alignment Length:614 Identity:197/614 - (32%)
Similarity:293/614 - (47%) Gaps:96/614 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 FRSKN--EGNIVYKCTVRLLDDSDVLECEFQPFHKGIYLLEYLCGELEIKEKDYFGLRYVDSSKQ 64
            |||.:  ..|...|||:||||||:| .|..|...||.:|:||:|....:.||||||:||||..||
Mouse    20 FRSSSIKSLNQEMKCTIRLLDDSEV-SCHIQRETKGQFLIEYICNYYSLLEKDYFGIRYVDPEKQ 83

  Fly    65 RHWLDLSKSIIKQCKEMDPLLFSLRVKFYPADPFRLTGN-ARIMLYQQLKRDLRHGRLYCSLGEA 128
            ||||:.:|||.||.|...|.....||||||.:|.::... .|.:||.|:|||:.||||.||..:|
Mouse    84 RHWLEPNKSIFKQMKSHPPYTMCFRVKFYPHEPLKIKEELTRYLLYLQIKRDIFHGRLLCSFSDA 148

  Fly   129 AALGALIVQEELGDYNEDVHVGSYVSSIELALRQTECLEKKIIELHKKREPGQNLSLAMDEFLGI 193
            |.|||.|||.|.|||..|.|..:|:|..|:..:|::.||:||:|:|.....||:.::|....|..
Mouse   149 AYLGACIVQAEFGDYYPDEHPENYISEFEIFPKQSQKLERKIMEIHNNELRGQSPAIAEFNLLLK 213

  Fly   194 ARGLETYGIDPHPVKDHRGSQQYVGINNTGISTFVAGKRSQHFRWNEIHKINFEGKMFIAHLSYT 258
            |..|||||:||||.||.||:..::|....|...|...||....:|:::.|:.||||.|     |.
Mouse   214 AHTLETYGVDPHPCKDSRGATAFLGFTAAGFVVFQGNKRIHLRKWSDVCKLKFEGKTF-----YV 273

  Fly   259 DASREPKKHTVGFKCPTGAACRYLWRCAIEQMLFFTLPNSQSAAVISGGGFFSWGTKFRYTGRTE 323
            ..|::.|...:.|...|.|||::||:|.:|...|:....|.....:|....|..|::|||:|:..
Mouse   274 IGSQKEKNAVLAFHTSTPAACKHLWKCGVENQAFYKYAKSSQIKTVSSSKIFFKGSRFRYSGKVA 338

  Fly   324 REIL------------TENINALREQKNNSNSSKRKASSVPATP--SSPQGDLAQIRYSS---LP 371
            :|::            ...:|..:.:..:|.:.:...:..|..|  .||.....::....   ||
Mouse   339 KEVVEASSKIQRDPPEVHRVNITQSRSFHSLNKQLIINMEPLQPLLPSPTEQEEEVPVGEGVPLP 403

  Fly   372 RSTMSEPLGYGMPNGHFYGHDHGMSDANGGIQISSLEPVCEEARLRSSNI--------------- 421
            :..:||||....|              ..|.|.:. .|..||.|::...:               
Mouse   404 KMDVSEPLIASSP--------------VKGAQCAD-PPDEEEDRVKEDPLTISELAYNPSASLLP 453

  Fly   422 -----DGVNYLASQIGGYAYRDSVEHSSTESGLTVNGYDH------PRKHNEARQHGSYSPNLYY 475
                 |.:|.|..    ...|..:|...|:|...:...::      ..:..||||..|:|.::..
Mouse   454 TPVDDDEINMLFD----CPSRLELEREDTDSFEELEADENAFLIAEEEELKEARQALSWSYSILT 514

  Fly   476 GQSDGAVNSSSPADSFLHADPSTRKVKKFRKFHLLHAFVPSVIFVAFAMAGTAVFIMES--ESEA 538
            |.              :..:|   .||.|.:  ||...:..::|| |.:   .:.::||  :...
Mouse   515 GH--------------IWVNP---LVKSFSR--LLVVGLGLLLFV-FPL---LLLLLESGIDLSF 556

  Fly   539 FEQLRNSPEMLCLRYQYYQPLKEFVLEKL 567
            ..::|.:||.....|:||.||||:|..|:
Mouse   557 LCEIRQTPEFEQFHYEYYCPLKEWVAGKV 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5022NP_609384.1 B41 13..205 CDD:214604 96/192 (50%)
FERM_N 16..80 CDD:286467 36/63 (57%)
FERM_M 108..205 CDD:278785 47/96 (49%)
FERM_C_FRMD3_FRMD5 186..294 CDD:270013 41/107 (38%)
FA 308..349 CDD:285894 9/52 (17%)
Frmd3NP_766457.1 B41 33..225 CDD:214604 96/192 (50%)
FERM_N 36..99 CDD:286467 36/63 (57%)
FERM_M 117..225 CDD:278785 48/107 (45%)
PH-like 206..309 CDD:302622 41/107 (38%)
FA 323..>357 CDD:285894 7/33 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841762
Domainoid 1 1.000 79 1.000 Domainoid score I8666
eggNOG 1 0.900 - - E1_KOG3530
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 306 1.000 Inparanoid score I2608
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D227685at33208
OrthoFinder 1 1.000 - - FOG0002996
OrthoInspector 1 1.000 - - otm43767
orthoMCL 1 0.900 - - OOG6_105621
Panther 1 1.100 - - LDO PTHR23280
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R7059
SonicParanoid 1 1.000 - - X1988
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.830

Return to query results.
Submit another query.