DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5022 and Frmd5

DIOPT Version :9

Sequence 1:NP_609384.1 Gene:CG5022 / 34398 FlyBaseID:FBgn0032225 Length:572 Species:Drosophila melanogaster
Sequence 2:XP_011237768.1 Gene:Frmd5 / 228564 MGIID:2442557 Length:599 Species:Mus musculus


Alignment Length:630 Identity:191/630 - (30%)
Similarity:266/630 - (42%) Gaps:131/630 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 YKCTVRLLDDSDVLECEFQPFHKGIYLLEYLCGELEIKEKDYFGLRYVDSSKQRHWLDLSKSIIK 76
            |.|||||||||: ..|..|...||.||.:.||..|.:.||||||:|:||..||||||:.:||::|
Mouse    17 YSCTVRLLDDSE-YTCTIQRDAKGQYLFDLLCHHLNLLEKDYFGIRFVDPDKQRHWLEFTKSVVK 80

  Fly    77 QCKEMDPLLFSLRVKFYPADPFRLTGN-ARIMLYQQLKRDLRHGRLYCSLGEAAALGALIVQEEL 140
            |.:...|.....|||||||||..|... .|.:::.|:||||.||||.|...:||.|.|.|:|.|:
Mouse    81 QLRSQPPFTMCFRVKFYPADPAALKEEITRYLVFLQIKRDLYHGRLLCKTSDAALLAAYILQAEI 145

  Fly   141 GDYNEDVHVGSYVSSIELALRQTECLEKKIIELHKKREPGQNLSLAMDEFLGIARGLETYGIDPH 205
            |||:...|...|.|..:...:.:|.|||||.|:||....||..:.:...||..|:.|||||:|||
Mouse   146 GDYDPGKHPEGYSSKFQFFPKHSEKLEKKIAEIHKTELSGQTPATSELNFLRKAQTLETYGVDPH 210

  Fly   206 PVKDHRGSQQYVGINNTGISTFVAGKRSQHF------------------------------RWNE 240
            |.||..|:..::.....|. ..:.|.:..||                              .|||
Mouse   211 PCKDVSGNAAFLAFTPFGF-VVLQGNKRVHFIKCILFASFTAAIHWAGGFKDFSTITPKPLSWNE 274

  Fly   241 IHKINFEGKMFIAHLSYTDASREPKKHTVGFKCPTGAACRYLWRCAIEQMLFFTLPNSQSAAVIS 305
            :.|:.||||.|..::|    .:|.||..:.:..||..||::||:|.||...|:.|..|.....:|
Mouse   275 VTKLKFEGKTFYLYVS----QKEEKKIILTYFAPTPEACKHLWKCGIENQAFYKLEKSSQVRTVS 335

  Fly   306 GGGFFSWGTKFRYTGRTEREILTENINALREQKNNSNSSKRKASSVPATPSSPQGDLAQIRYSSL 370
            ....|..|::|||:||..:|::..:....||......:....:.|.|:....|       |.||:
Mouse   336 SSNLFFKGSRFRYSGRVAKEVMESSAKIKREPPEIHRAGMVPSRSCPSITHGP-------RLSSV 393

  Fly   371 PR-------------------STMSEPLGYGMPNGHFYGH-DHGMSDANGGIQISSLE------- 408
            ||                   |..|.|:........|..| ....:|:|..:.:.:.|       
Mouse   394 PRTRRRAVHISIMEGLESLRDSAHSTPVRSSSHGDTFLPHVRSSRADSNERVAVIADEAYSPADS 458

  Fly   409 ----PVCE---EARLRSSNIDGVNYLASQIGGYAYRDSVEHSSTESGLTVNGYDHPRKHNEARQH 466
                ||.|   |..|.|..|:|...            |:|........|...       .||...
Mouse   459 VLPTPVAEHSLELMLLSRQINGATC------------SIEEEKESEASTPTA-------TEAEAL 504

  Fly   467 GSYSPNLYYGQSDGAVNSSSPADSFLHADPSTRKVKKFRKFHLLHAFVPSVIFVAFAMAG----- 526
            |.....|..|                |......:|.|         ||.||:.:.....|     
Mouse   505 GGELRALCQG----------------HGGSEQEQVNK---------FVLSVLRLLLVTMGLLFVL 544

  Fly   527 --TAVFIMESESEA--FEQLRNSPEMLCLRYQYYQPLKEFVLEKL 567
              ..:.:.||:.:.  |..:|.:||.....|||:.||:.:...|:
Mouse   545 LLLLIILTESDLDVAFFRDIRQTPEFEQFHYQYFCPLRRWFACKI 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5022NP_609384.1 B41 13..205 CDD:214604 92/192 (48%)
FERM_N 16..80 CDD:286467 35/63 (56%)
FERM_M 108..205 CDD:278785 43/96 (45%)
FERM_C_FRMD3_FRMD5 186..294 CDD:270013 42/137 (31%)
FA 308..349 CDD:285894 10/40 (25%)
Frmd5XP_011237768.1 B41 19..210 CDD:214604 92/191 (48%)
PH-like 191..324 CDD:388408 42/137 (31%)
FA 338..383 CDD:370090 11/44 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841760
Domainoid 1 1.000 79 1.000 Domainoid score I8666
eggNOG 1 0.900 - - E1_KOG3530
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 306 1.000 Inparanoid score I2608
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002996
OrthoInspector 1 1.000 - - otm43767
orthoMCL 1 0.900 - - OOG6_105621
Panther 1 1.100 - - O PTHR23280
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R7059
SonicParanoid 1 1.000 - - X1988
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1211.820

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