DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frmd5 and epb41l1

DIOPT Version :10

Sequence 1:NP_609384.1 Gene:Frmd5 / 34398 FlyBaseID:FBgn0032225 Length:572 Species:Drosophila melanogaster
Sequence 2:XP_012808193.1 Gene:epb41l1 / 100127644 XenbaseID:XB-GENE-877327 Length:1292 Species:Xenopus tropicalis


Alignment Length:397 Identity:138/397 - (34%)
Similarity:203/397 - (51%) Gaps:16/397 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 CTVRLLDDSDVLECEFQPFHKGIYLLEYLCGELEIKEKDYFGLRYVDSSKQRHWLDLSKSIIKQC 78
            |.|.|||.|: .|||.:...:|..|.:.:||.|.:.|||||||.:.|:..|::|||.||.|.||.
 Frog    88 CRVTLLDSSN-YECEIEKHARGQVLFDTVCGHLNLLEKDYFGLTFCDTDSQKNWLDPSKEIKKQI 151

  Fly    79 K-EMDPLLFSLRVKFYPADPFRLTGN-ARIMLYQQLKRDLRHGRLYCSLGEAAALGALIVQEELG 141
            | |.....|...|||||.||.:||.: .|..|..||:.|:..|||.||....|.||:..||.|||
 Frog   152 KSECGAWTFGFTVKFYPPDPSQLTEDITRYYLCLQLRADIISGRLPCSFVTHALLGSYTVQAELG 216

  Fly   142 DYNEDVHVGSYVSSIELALRQTECLEKKIIELHKKREPGQNLSLAMDEFLGIARGLETYGIDPHP 206
            ||:.:.:.|:|||.:..:..||..||::|:||||... |...:.|...||..|:.|..||:|.|.
 Frog   217 DYDPEENHGNYVSELRFSPNQTRELEERIMELHKTYR-GMTPAEAEIHFLENAKKLSMYGVDLHH 280

  Fly   207 VKDHRGSQQYVGINNTGISTFVAGKRSQHFRWNEIHKINFEGKMFIAHLSYTDASREPKKHTVGF 271
            .||..|....:|:...|:..:....|...|.|.:|.||:::...|  ::.......|..:.|:||
 Frog   281 AKDSEGIDIMLGVCANGLLIYRDRLRINRFAWPKILKISYKRSNF--YIKIRPGEYEQFESTIGF 343

  Fly   272 KCPTGAACRYLWRCAIEQMLFFTLPNSQSAAVISGGGFFSWGTKFRYTGRTEREILTENINALRE 336
            |.|...|.:.||:..||...||.|.:.:.|.    .||...|:||||:|||:.:  |:..:||.:
 Frog   344 KLPNHRAAKRLWKVCIEHHTFFRLVSPEPAP----KGFLVMGSKFRYSGRTQAQ--TQQASALID 402

  Fly   337 QKNNSNSSKRKASSVPATPSSPQGDLAQIRYSSLPRSTMSEPLGYGMPNGHFYGHDHGMSDANGG 401
            :.  :.:.||.:|.......|.:|..:  |.:::..:..|.|......:|.....:.|..:....
 Frog   403 RP--APNFKRSSSKRYTLSQSQEGGFS--RPTAVNENHESSPEKNHEDHGEELDREEGQEEVTTP 463

  Fly   402 IQISSLE 408
            .:|..|:
 Frog   464 TKIKELK 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frmd5NP_609384.1 FERM_F1_FRMD3 12..93 CDD:340622 36/79 (46%)
FERM_M 104..205 CDD:459788 42/100 (42%)
FERM_C_FRMD3_FRMD5 186..294 CDD:270013 33/107 (31%)
FA 308..350 CDD:462582 15/41 (37%)
epb41l1XP_012808193.1 B41 88..279 CDD:214604 85/192 (44%)
FERM_C_4_1_family 274..367 CDD:270005 29/94 (31%)
FA 376..419 CDD:462582 16/46 (35%)
BMS1 <394..>725 CDD:227519 15/81 (19%)
SAB 481..522 CDD:461285
4_1_CTD <1226..1279 CDD:461774
Blue background indicates that the domain is not in the aligned region.

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