DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sps2 and Sephs2

DIOPT Version :10

Sequence 1:NP_477478.4 Gene:Sps2 / 34397 FlyBaseID:FBgn0032224 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_001073358.2 Gene:Sephs2 / 308993 RGDID:1308827 Length:451 Species:Rattus norvegicus


Alignment Length:395 Identity:168/395 - (42%)
Similarity:235/395 - (59%) Gaps:35/395 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 FQPEKHGLEPDFQLTKFTTHTGUSCKIPQKVLEKYLRGTE---------------IENKNNDGYL 51
            |:|:..|..|.::||.|:...| .||:||:.|.|.|.|..               .|....:|.|
  Rat    40 FEPQTLGFSPSWRLTSFSGMKGUGCKVPQETLLKLLEGLTRPALQPPLTSGLVGGQEETVQEGGL 104

  Fly    52 ------------IGSGMDCAVIPLKRHKDYLLIQTVDFFYPMVNDPELLGRIALANVLSDVYAVG 104
                        :..|||..|||| ||....|:||.|||||:|.||.::||||.||||||:||:|
  Rat   105 TTRPGPGSAFPSLSIGMDSCVIPL-RHGGLSLVQTTDFFYPLVEDPYMMGRIACANVLSDLYAMG 168

  Fly   105 VTQFDTVEMIVSTSTSFSEKERDVVIGLVMKGFQNSLKANGYRNTPLIIRQLKINPWCIIGGIAT 169
            :|:.|.:.|::|.|.|.|||||:.|..|::|||:::.:..|   |.:...|..:|||.||||:||
  Rat   169 ITECDNMLMLLSVSQSMSEKEREKVTPLMIKGFRDAAEEGG---TAVTGGQTVVNPWIIIGGVAT 230

  Fly   170 SVCRSEEIILPSNAQPGDVLVLTKPLGGQMAMDAHLWQLNQTEKYKKLLSECSDADIKETFEIAV 234
            .||:..|.|:|.:|..|||||||||||.|:|.:||.| |:..||:.|:....|..:::..::.|:
  Rat   231 VVCQQNEFIMPDSAVVGDVLVLTKPLGTQVAANAHQW-LDNPEKWNKIKMVVSREEVELAYQEAM 294

  Fly   235 KSMTYLNKNAALLMHKYQAHCATDITGFGLLGHANNLAQFQKEKVLFQINKLPIIKNVLKFSTLV 299
            .:|..||:.||.|||.:.||.||||||||:|||:.|||:.||.:|.|.|:.||||..:...|...
  Rat   295 FNMATLNRTAASLMHTFNAHAATDITGFGILGHSQNLAKQQKNEVSFVIHNLPIIAKMAAISKAS 359

  Fly   300 GQSTKFRSGRSVETSGGLLICLPADAADKFCRDFEEATNGE-QKSFQIGHVTAANESDAVLCEDV 363
            |:....: |.|.|||||||||||.:.|.:||.:.:.:..|| .:::.:|.|...|.: |.:.:..
  Rat   360 GRFGLLQ-GTSAETSGGLLICLPREQAARFCSEIKSSKYGEGHQAWIVGIVEKGNRT-ARIIDKP 422

  Fly   364 EFIEV 368
            ..|||
  Rat   423 RVIEV 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sps2NP_477478.4 SelD 15..349 CDD:100031 159/361 (44%)
Sephs2NP_001073358.2 SelD 53..409 CDD:100031 159/361 (44%)

Return to query results.
Submit another query.