DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sps2 and Sephs1

DIOPT Version :10

Sequence 1:NP_477478.4 Gene:Sps2 / 34397 FlyBaseID:FBgn0032224 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_001098100.1 Gene:Sephs1 / 291314 RGDID:1311182 Length:392 Species:Rattus norvegicus


Alignment Length:376 Identity:160/376 - (42%)
Similarity:234/376 - (62%) Gaps:14/376 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 FQPEKHGLEPDFQLTKFTTHTGUSCKIPQKVLEKYLRGTEIENKNNDGYLIGS-------GMDCA 59
            |.||.:.|:..|:||:||...|..||:||.||:|.|...:..:...|...:|:       |||..
  Rat     7 FNPETYELDKSFRLTRFTELKGTGCKVPQDVLQKLLESLQENHFQEDEQFLGAVMPRLGIGMDTC 71

  Fly    60 VIPLKRHKDYLLIQTVDFFYPMVNDPELLGRIALANVLSDVYAVGVTQFDTVEMIVSTSTSFSEK 124
            |||| ||....|:||.|:.||:|:||.::||||.||||||:||:|||:.|.:.|::..|...:::
  Rat    72 VIPL-RHGGLSLVQTTDYIYPIVDDPYMMGRIACANVLSDLYAMGVTECDNMLMLLGVSNKMTDR 135

  Fly   125 ERDVVIGLVMKGFQNSLKANGYRNTPLIIRQLKINPWCIIGGIATSVCRSEEIILPSNAQPGDVL 189
            |||.|:.|:::||:::.:..|   |.:...|..:|||.::||:||:||:..|.|:|.||.|||||
  Rat   136 ERDKVMPLIIQGFKDAAEEAG---TSVTGGQTVLNPWIVLGGVATTVCQPNEFIMPDNAVPGDVL 197

  Fly   190 VLTKPLGGQMAMDAHLWQLNQTEKYKKLLSECSDADIKETFEIAVKSMTYLNKNAALLMHKYQAH 254
            |||||||.|:|:..|.| |:..||:.|:....:..|::..::.|:.:|..||:.||.|||.:.||
  Rat   198 VLTKPLGTQVAVAVHQW-LDIPEKWNKIKLVVTQEDVELAYQEAMVNMARLNRTAAGLMHTFNAH 261

  Fly   255 CATDITGFGLLGHANNLAQFQKEKVLFQINKLPIIKNVLKFSTLVGQSTKFRSGRSVETSGGLLI 319
            .||||||||:||||.|||:.|:.:|.|.|:.||::..:...|...|.......|...||||||||
  Rat   262 AATDITGFGILGHAQNLAKQQRNEVSFVIHNLPVLAKMAAVSKACGNMFGLMHGTCPETSGGLLI 326

  Fly   320 CLPADAADKFCRDFEEATNGE-QKSFQIGHVTAANESDAVLCEDVEFIEVS 369
            |||.:.|.:||.:.:....|| .:::.||.|...|.: |.:.:....|||:
  Rat   327 CLPREQAARFCAEIKSPKYGEGHQAWIIGIVEKGNRT-ARIIDKPRIIEVA 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sps2NP_477478.4 SelD 15..349 CDD:100031 149/341 (44%)
Sephs1NP_001098100.1 selD 19..333 CDD:273100 142/318 (45%)

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