DRSC/TRiP Functional Genomics Resources

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Protein Alignment SamDC and amd1

DIOPT Version :10

Sequence 1:NP_477223.2 Gene:SamDC / 34396 FlyBaseID:FBgn0019932 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_001155073.1 Gene:amd1 / 792097 ZFINID:ZDB-GENE-040426-760 Length:334 Species:Danio rerio


Alignment Length:346 Identity:164/346 - (47%)
Similarity:224/346 - (64%) Gaps:24/346 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLENGSHFFEGVEKLLEIWF--EESSNGDDDLRNISRSDWENVLSNVNCQIISTSKNDIIDAFVL 63
            |.|:.:|||||.|||||:||  ::.:.|..|||.|.|.:|:.:|.||:|.|||.:|.|..:|::|
Zfish     1 MEESSAHFFEGTEKLLEVWFSRQDEAKGTGDLRTIPRFEWDKLLENVHCLIISVTKTDKQEAYIL 65

  Fly    64 SESSMFVSKRRWILKTCGTTTPLKCLGQLLKLA-EANGYNVVADLFYSRKNFTRPEAQITPHQGF 127
            |||||||||||:||||||||..|:.|..||:|| |..|::.:.:.|||||||.:|..|..||:.|
Zfish    66 SESSMFVSKRRFILKTCGTTLLLQALVPLLELAREYCGFDAIENFFYSRKNFMKPTHQEFPHRNF 130

  Fly   128 TEEVTYLDSIFPNGRSYCLGSMNLECWYLYTFSRSDIKITPQLISDEKNVDSDPDQTIEILMQDL 192
            .|||.:|..|||||.:||:|.:|.:||||:|..      .|:...:::     .|||:|:||.||
Zfish   131 QEEVEFLSQIFPNGAAYCMGRLNSDCWYLFTLE------LPEFWENKQ-----ADQTLEVLMSDL 184

  Fly   193 DPETMSIFYKNKFNDANGATVKSGIDTILPTMHIDDFLFDPCGYSMNGINDKGEYMTIHITPENQ 257
            ||..|..||......||..|..|||..::|...||..:|:||||||||:...|.|.|||||||.:
Zfish   185 DPAVMDQFYMKDGVSANDVTRMSGIRDLIPGSVIDATMFNPCGYSMNGMKTDGTYWTIHITPEPE 249

  Fly   258 FSYVSFETNVALSNYRKLINQVINTFKPGKFIVTIFAN---KCSLAYETMKELEVEYSQGSHWKR 319
            |||||||||::.::|.:||.:|::.||||||:.|:|.|   ||...:.:.::||       .::.
Zfish   250 FSYVSFETNLSQTSYDELICRVVDVFKPGKFVTTLFVNQSSKCRSVFSSAQKLE-------SYRL 307

  Fly   320 TDMQCCNFPSYNLLFAQYSHS 340
            .|.|..:|..||.:|..|:.|
Zfish   308 LDRQLAHFNDYNFVFTSYAKS 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SamDCNP_477223.2 SAM_decarbox 6..337 CDD:460243 160/336 (48%)
amd1NP_001155073.1 SAM_decarbox 6..325 CDD:460243 160/336 (48%)

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