DRSC/TRiP Functional Genomics Resources

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Protein Alignment SamDC and amd1

DIOPT Version :10

Sequence 1:NP_477223.2 Gene:SamDC / 34396 FlyBaseID:FBgn0019932 Length:347 Species:Drosophila melanogaster
Sequence 2:XP_017949396.1 Gene:amd1 / 549897 XenbaseID:XB-GENE-484611 Length:376 Species:Xenopus tropicalis


Alignment Length:299 Identity:158/299 - (52%)
Similarity:205/299 - (68%) Gaps:14/299 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLENGSHFFEGVEKLLEIWF--EESSNGDDDLRNISRSDWENVLSNVNCQIISTSKNDIIDAFVL 63
            |.|:.:|||||.|||||:||  ::.|.|..|||:|.|.:|:.:|.||:|.|||.:|.|..:|:||
 Frog     3 MEESAAHFFEGTEKLLEVWFSQQDESKGSGDLRDIPRFEWDKLLENVHCLIISVTKTDKQEAYVL 67

  Fly    64 SESSMFVSKRRWILKTCGTTTPLKCLGQLLKLA-EANGYNVVADLFYSRKNFTRPEAQITPHQGF 127
            |||||||||||:||||||||..|:.|..||:|| |..|::.:.:.|||||||.:|:.|..||:.|
 Frog    68 SESSMFVSKRRFILKTCGTTLLLQALVPLLELAREYCGFDGIQNFFYSRKNFMKPDHQEYPHRNF 132

  Fly   128 TEEVTYLDSIFPNGRSYCLGSMNLECWYLYTFSRSDIKITPQLISDEKNVDSDPDQTIEILMQDL 192
            .|||.:|:.|||||.:||:|.:|.:||||||....|..:..|           ||||:||||.:|
 Frog   133 QEEVEFLNQIFPNGAAYCMGRINSDCWYLYTLDIPDGYVINQ-----------PDQTLEILMSEL 186

  Fly   193 DPETMSIFYKNKFNDANGATVKSGIDTILPTMHIDDFLFDPCGYSMNGINDKGEYMTIHITPENQ 257
            |||.|..||..:...||..|..|||..::....||..:|.||||||||:...|.|.|||||||.:
 Frog   187 DPEVMDQFYMKEGVTANDVTRVSGIRDLITGSVIDATMFSPCGYSMNGMKSDGTYWTIHITPEPE 251

  Fly   258 FSYVSFETNVALSNYRKLINQVINTFKPGKFIVTIFANK 296
            ||||||||||:|:.|..||::|::.|||.||:.|:|.|:
 Frog   252 FSYVSFETNVSLTTYDDLISKVVDVFKPRKFVTTLFVNQ 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SamDCNP_477223.2 SAM_decarbox 6..337 CDD:460243 156/294 (53%)
amd1XP_017949396.1 SAM_decarbox 8..307 CDD:460243 156/294 (53%)

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