DRSC/TRiP Functional Genomics Resources

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Protein Alignment SamDC and Amd1

DIOPT Version :10

Sequence 1:NP_477223.2 Gene:SamDC / 34396 FlyBaseID:FBgn0019932 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_033795.1 Gene:Amd1 / 11702 MGIID:88004 Length:334 Species:Mus musculus


Alignment Length:345 Identity:168/345 - (48%)
Similarity:221/345 - (64%) Gaps:26/345 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SHFFEGVEKLLEIWF----EESSNGDDDLRNISRSDWENVLSNVNCQIISTSKNDIIDAFVLSES 66
            :|||||.|||||:||    .::|.|..|||.|.||:|:.:|.:|.|.|||.:|.|..:|:|||||
Mouse     4 AHFFEGTEKLLEVWFSRQQSDASQGSGDLRTIPRSEWDVLLKDVQCSIISVTKTDKQEAYVLSES 68

  Fly    67 SMFVSKRRWILKTCGTTTPLKCLGQLLKLA-EANGYNVVADLFYSRKNFTRPEAQITPHQGFTEE 130
            ||||||||:||||||||..||.|..||||| :.:|::.:...|||||||.:|..|..||:.|.||
Mouse    69 SMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQGYPHRNFQEE 133

  Fly   131 VTYLDSIFPNGRSYCLGSMNLECWYLYTFSRSDIKITPQLISDEKNVDSDPDQTIEILMQDLDPE 195
            :.:|::|||||.:||:|.||.:||||||           |...|..|.|.||||:||||.:|||.
Mouse   134 IEFLNAIFPNGAAYCMGRMNSDCWYLYT-----------LDFPESRVISQPDQTLEILMSELDPA 187

  Fly   196 TMSIFYKNKFNDANGATVKSGIDTILPTMHIDDFLFDPCGYSMNGINDKGEYMTIHITPENQFSY 260
            .|..||......|...|.:|||..::|...||..||:||||||||:...|.|.|||||||.:|||
Mouse   188 VMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATLFNPCGYSMNGMKSDGTYWTIHITPEPEFSY 252

  Fly   261 VSFETNVALSNYRKLINQVINTFKPGKFIVTIFAN---KCSLAYETMKELEVEYSQGSHWKRTDM 322
            ||||||::.::|..||.:|:..||||||:.|:|.|   ||.....:.::::       .:||.|.
Mouse   253 VSFETNLSQTSYDDLIRKVVEVFKPGKFVTTLFVNQSSKCRTVLSSPQKID-------GFKRLDC 310

  Fly   323 QCCNFPSYNLLFAQYSHSEK 342
            |...|..||.:|..::..::
Mouse   311 QSAMFNDYNFVFTSFAKKQQ 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SamDCNP_477223.2 SAM_decarbox 6..337 CDD:460243 168/338 (50%)
Amd1NP_033795.1 SAM_decarbox 4..325 CDD:460243 168/338 (50%)

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