DRSC/TRiP Functional Genomics Resources

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Protein Alignment GATAd and GAT3

DIOPT Version :9

Sequence 1:NP_001260326.1 Gene:GATAd / 34395 FlyBaseID:FBgn0032223 Length:842 Species:Drosophila melanogaster
Sequence 2:NP_013113.1 Gene:GAT3 / 850700 SGDID:S000004003 Length:141 Species:Saccharomyces cerevisiae


Alignment Length:158 Identity:37/158 - (23%)
Similarity:54/158 - (34%) Gaps:57/158 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   608 STVSFTKVPEEPIALLKDLSEAQSSKSKPCRRKQSFPTKTDCIDVVNENVTDTYTTSEATPDDKK 672
            |..|.....||.|...|..|:.:.:.:||.  ..|....|:...||..||               
Yeast    15 SVESLLNPVEETIDCEKPHSQTKINTAKPI--SASLYVTTNNTAVVQHNV--------------- 62

  Fly   673 DKRNINLFNAIPGAQKDMSCSNCGTL-TTTIWRRSVRGEM-VCNACGLYFK-------------- 721
            .||.        |..:  .|..|..: |:..||....||: :||||||:::              
Yeast    63 QKRK--------GVTR--RCPQCAVIKTSPQWREGPDGEVTLCNACGLFYRKIFLVFGKDLAKRY 117

  Fly   722 ---LHGVNRPHSMRRDTIHTRRRRPKEL 746
               :.||:           .:|:.||.|
Yeast   118 FNEIKGVS-----------VKRKVPKSL 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAdNP_001260326.1 zf-AD <228..284 CDD:214871
ZnF_GATA 688..736 CDD:214648 15/66 (23%)
ZnF_GATA 691..742 CDD:238123 16/69 (23%)
GAT3NP_013113.1 GAT1 <1..>141 CDD:227928 37/158 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5641
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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