DRSC/TRiP Functional Genomics Resources

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Protein Alignment GATAd and BBX16

DIOPT Version :10

Sequence 1:NP_609383.2 Gene:GATAd / 34395 FlyBaseID:FBgn0032223 Length:842 Species:Drosophila melanogaster
Sequence 2:NP_177528.1 Gene:BBX16 / 843723 AraportID:AT1G73870 Length:392 Species:Arabidopsis thaliana


Alignment Length:319 Identity:57/319 - (17%)
Similarity:105/319 - (32%) Gaps:91/319 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 PSPSASLSQSQTKS--EPMREEEEHQHNHNQQSGREETSVNTTN--------------------- 214
            |:..|.|.||...|  ......:.|:....|.|...||:..||:                     
plant    36 PADDAFLCQSCDASIHSANHLAKRHERVRLQSSSPTETADKTTSVWYEGFRRKARTPRSKSCAFE 100

  Fly   215 ----ISGTDNYGKEHGRDDS------SSPHLTFQIFNCLSIKALP-----NDGLPNVVCGDCRQK 264
                |...|....|.|.|:.      ||...|.:..||    .:|     :|.|.:.:.|.|...
plant   101 KLLQIESNDPLVPELGGDEDDGFFSFSSVEETEESLNC----CVPVFDPFSDMLIDDINGFCLVP 161

  Fly   265 LDSFEKFRTMAHNSQIALKE--------FLNISKNLRPDPNDLETKLDAILKASSEAIAAKALTE 321
                ::......|.::...|        |:.... |..|..||...::::|:.....:..|...:
plant   162 ----DEVNNTTTNGELGEVEKAIMDDEGFMGFVP-LDMDLEDLTMDVESLLEEEQLCLGFKEPND 221

  Fly   322 LSTF---SKVKYDHSKLDSSIQPGLDRKIEISNQEMPAHSLYPSLFKSITMKSDQKSKAMSGSSH 383
            :...   :||.::.:..|.       ::::..::|                  ::::|..:|.|.
plant   222 VGVIKEENKVGFEINCKDL-------KRVKDEDEE------------------EEEAKCENGGSK 261

  Fly   384 SQFDSKLQKDSDIEKYENLQQQLETAAVLMDISK-----KIVISPPCSNPQSPCFSAAV 437
               ||..:..:|.::..:|..:|:..||:.....     |..|.|.|....:.|....|
plant   262 ---DSDREASNDKDRKTSLFLRLDYGAVISAWDNHGSPWKTGIKPECMLGGNTCLPHVV 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAdNP_609383.2 zf-AD <228..284 CDD:214871 12/66 (18%)
GAT1 625..>742 CDD:227928
ZnF_GATA 691..742 CDD:238123
BBX16NP_177528.1 Bbox1_BBX-like 22..65 CDD:380879 7/28 (25%)
CCT 345..387 CDD:461849
Blue background indicates that the domain is not in the aligned region.

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