DRSC/TRiP Functional Genomics Resources

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Protein Alignment GATAd and APRR6

DIOPT Version :10

Sequence 1:NP_609383.2 Gene:GATAd / 34395 FlyBaseID:FBgn0032223 Length:842 Species:Drosophila melanogaster
Sequence 2:NP_176988.4 Gene:APRR6 / 843150 AraportID:AT1G68210 Length:755 Species:Arabidopsis thaliana


Alignment Length:467 Identity:95/467 - (20%)
Similarity:154/467 - (32%) Gaps:168/467 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 QQSGREETSVNTTN--ISGTDNYGKEHGR--DDSSSPHLTFQIF-NCLSIKALPNDGLPNVVCGD 260
            ||..:...||:..:  :|..:...||.|.  .:...||:....| |.|.:|.:|           
plant    33 QQFSKRVMSVDVASKALSMIEKQKKEIGLIIANIEMPHIDSHSFLNALLLKDIP----------- 86

  Fly   261 CRQKLDSFEKFRTMAHNSQIALKEFLNISKNLRPDPNDLETKLDAILKASSEAIAAKALTELSTF 325
                        .:..|.:|..||           |:||                   ||:.:.|
plant    87 ------------LILINPEIKTKE-----------PSDL-------------------LTKRACF 109

  Fly   326 SKVKYDHSKLDSSIQPGLDRKI---EISNQEMPAHSLYPSLFKSITMKSDQKSKAMSGSSHSQFD 387
            |                ||:.|   :|.|......|......|.|.:..||             :
plant   110 S----------------LDKPISNDDIKNMWQHVFSKKSQELKKINITEDQ-------------E 145

  Fly   388 SKLQKDS-DIEKYE-NLQQQLETAAVLMDISKKIVISPPCSNPQSPCFSAAVDTSIKSSVIK--- 447
            :.:.||: .||.:. ||::|..:.|.|:.           ..|....||.......:.|:..   
plant   146 NVMDKDTYQIEAFRANLKRQRISQASLLG-----------RRPFIDTFSTYETFQKRKSIANVEW 199

  Fly   448 SKRPSNQNEIQD-GVEIDLSVKKQKNDYSNQRNAAPIHHFCQTPMLDIQSHLR--------SEED 503
            ...||...||:: ..|...||.::|:.::::|                  |::        .|||
plant   200 KTTPSYAIEIENKRKEWKKSVGRRKSLWNSER------------------HMKFIAAISILGEED 246

  Fly   504 FQNYSI---------TINQVGGSDFKSKA---------PKASTGSLLDSGDSSDSHKLEMDITSS 550
            |:..||         |..|||....|.||         |:..:.|:..:.:...::|....|:..
plant   247 FRPKSILEIMNDPNLTHRQVGSHLQKYKAQIDQISYTLPRNESRSIDKTFEYPSNYKYPFKISDL 311

  Fly   551 INDRKTPDSL-SSDHATDAATTQLWQALARSAAKSKEDN-PASQI--------------FRNMMS 599
            .|:....:|| :|....::|:..:.|.|.:.....||:. |...|              ..|.:|
plant   312 TNNLIVSNSLWNSLEKKNSASASITQFLFKKPIGEKEETMPKFHIGGKLDLSNHSVHGNVLNKLS 376

  Fly   600 QPFAFPVPSTVS 611
            ....| ||||:|
plant   377 MNVNF-VPSTIS 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAdNP_609383.2 zf-AD <228..284 CDD:214871 9/56 (16%)
GAT1 625..>742 CDD:227928
ZnF_GATA 691..742 CDD:238123
APRR6NP_176988.4 REC_typeB_ARR-like 15..128 CDD:381121 31/163 (19%)
SANT 227..273 CDD:473887 12/63 (19%)
Blue background indicates that the domain is not in the aligned region.

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