DRSC/TRiP Functional Genomics Resources

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Protein Alignment GATAd and ARR11

DIOPT Version :10

Sequence 1:NP_609383.2 Gene:GATAd / 34395 FlyBaseID:FBgn0032223 Length:842 Species:Drosophila melanogaster
Sequence 2:NP_176938.1 Gene:ARR11 / 843096 AraportID:AT1G67710 Length:521 Species:Arabidopsis thaliana


Alignment Length:424 Identity:75/424 - (17%)
Similarity:154/424 - (36%) Gaps:132/424 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 DHEHIEYSGETPSPSASLSQSQTKSEPMREEEEHQHNHNQQS------GREETSVNTTNISGTDN 220
            |..|....||..|..........:.:.:::|.:...:.::::      ......||..|      
plant   153 DEAHFLGGGEDVSFGKKRKDFDFEKKLLQDESDPSSSSSKKARVVWSFELHHKFVNAVN------ 211

  Fly   221 YGKEHGRDDSSSPHLTFQIFNCLSIKALPNDGLPNVVCGDCRQK----LDSFEKFRTMAHNSQIA 281
               :.|.|..:.|.   :|.:.:::..|..:.:.:.:     ||    |...||.:        .
plant   212 ---QIGCDHKAGPK---KILDLMNVPWLTRENVASHL-----QKYRLYLSRLEKGK--------E 257

  Fly   282 LKEFLNISKNLRPDPNDLETKL---------------DAILKASSE----AIAAKALTELST--- 324
            ||.:....||....|.|:|...               :::::.::|    .:|:.:|::|:|   
plant   258 LKCYSGGVKNADSSPKDVEVNSGYQSPGRSSYVFSGGNSLIQKATEIDPKPLASASLSDLNTDVI 322

  Fly   325 ------FSKVKYD----HSKLDSSI-----------QPGLDRKIEISNQEMPAHSLY-----PSL 363
                  .:::.:|    .|..||.:           :|.|.....:..|.:|:.|.|     |||
plant   323 MPPKTKKTRIGFDPPISSSAFDSLLPWNDVPEVLESKPVLYENSFLQQQPLPSQSSYVANSAPSL 387

  Fly   364 FKSITMKSDQKSKAMSGSSHSQFDSKLQKD-------SDIEKYENLQQQLETAAVLMDISKKIVI 421
            .:. .||...::.| .|||.:..:..:.:|       .|::......|:..|.|:|..::.::  
plant   388 MEE-EMKPPYETPA-GGSSVNADEFLMPQDKIPTVTLQDLDPSAMKLQEFNTEAILRSLNWEL-- 448

  Fly   422 SPPCSNPQSPCFSAAVDTSIKSSVIKSKRPSNQNEIQDGVEIDLSVKKQKNDYSNQRNAAPIHHF 486
                  |:|. .|.::||.:..:.::.:|            ...:...|..|||:          
plant   449 ------PESH-HSVSLDTDLDLTWLQGER------------FLANTGLQFQDYSS---------- 484

  Fly   487 CQTPML--DIQSHLR---SEE--DFQNYSITINQ 513
              :|.|  ::.:||.   :|.  |...||..::|
plant   485 --SPSLLSELPAHLNWYGNERLPDPDEYSFMVDQ 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAdNP_609383.2 zf-AD <228..284 CDD:214871 10/59 (17%)
GAT1 625..>742 CDD:227928
ZnF_GATA 691..742 CDD:238123
ARR11NP_176938.1 REC_typeB_ARR-like 13..127 CDD:381121
myb_SHAQKYF 194..247 CDD:130620 10/69 (14%)
Blue background indicates that the domain is not in the aligned region.

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