DRSC/TRiP Functional Genomics Resources

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Protein Alignment GATAd and GATA11

DIOPT Version :9

Sequence 1:NP_001260326.1 Gene:GATAd / 34395 FlyBaseID:FBgn0032223 Length:842 Species:Drosophila melanogaster
Sequence 2:NP_001077485.1 Gene:GATA11 / 837316 AraportID:AT1G08010 Length:303 Species:Arabidopsis thaliana


Alignment Length:251 Identity:63/251 - (25%)
Similarity:101/251 - (40%) Gaps:55/251 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   543 LEMDITS---------SINDRKTPDSLSSDHATDAATTQLWQALARSAAK-SK-----------E 586
            |..|:||         .::.::...:|...::::|.::.|.|:.|....| ||           |
plant    63 LPSDLTSCGSGMAKAPRVDIQRNIPALKQSYSSEALSSTLHQSSAPPEIKVSKLFQSLSPVSVLE 127

  Fly   587 DNPASQIFRNMMSQPFAFPVPSTVSFTKVPEEPIALLKDLSEAQSSKSKPCRRKQSFPTKTDCID 651
            ::..|....|..||..||||....|..|.|       ..|..:....|:|.:.::|.|.|.:   
plant   128 NSYGSLSTHNNGSQRLAFPVKGMRSKRKRP-------TTLRLSYLFPSEPRKPEKSTPGKPE--- 182

  Fly   652 VVNENVTDTYTTSEATPDDKKDKRNINLFNAIPGAQKDMS--------CSNCGTLTTTIWRRSVR 708
                  ::.|.:||   ...|.||.|:|......:..:.|        |::|.|..|..||....
plant   183 ------SECYFSSE---QHAKKKRKIHLTTRTVSSTLEASNSDGIVRKCTHCETTKTPQWREGPS 238

  Fly   709 G-EMVCNACGLYF---KLHGVNRPHSMRR--DTIHTRRRRPKELERSKKKHKQMSS 758
            | :.:|||||:.|   :|....||.|...  ..:|:...| |.:|..:|..:|..|
plant   239 GPKTLCNACGVRFRSGRLVPEYRPASSPTFIPAVHSNSHR-KIIEMRRKDDEQFDS 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAdNP_001260326.1 zf-AD <228..284 CDD:214871
ZnF_GATA 688..736 CDD:214648 18/61 (30%)
ZnF_GATA 691..742 CDD:238123 19/64 (30%)
GATA11NP_001077485.1 ZnF_GATA 217..270 CDD:214648 17/52 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5641
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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