DRSC/TRiP Functional Genomics Resources

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Protein Alignment GATAd and PRR3

DIOPT Version :10

Sequence 1:NP_609383.2 Gene:GATAd / 34395 FlyBaseID:FBgn0032223 Length:842 Species:Drosophila melanogaster
Sequence 2:NP_001190575.1 Gene:PRR3 / 836132 AraportID:AT5G60100 Length:522 Species:Arabidopsis thaliana


Alignment Length:571 Identity:112/571 - (19%)
Similarity:180/571 - (31%) Gaps:196/571 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 QTKSEPMREEEEHQHNHNQQSGREETSVNTTN--ISGTDNYGKEH------------------GR 227
            :|..|...|.:....:...:...|:|:.||.|  ||........|                  ..
plant     7 ETGDEVETERQVFGSSEEDEFRVEDTARNTNNVQISQQQQQPLAHVVKWERYLPVRSLKVLLVEN 71

  Fly   228 DDSSSPHLTFQIFNC-LSIKALPNDGLPNVVCGDCRQKLDSFEKFRTMAHNSQIALKEFLNISKN 291
            |||:...:|..:.|| ..:.|:|                |..|.:|.:                 
plant    72 DDSTRHIVTALLKNCSYEVTAVP----------------DVLEAWRIL----------------- 103

  Fly   292 LRPDPNDLETKLDAILK-----------ASSEAIAAKALTELSTFSKVKYD----------HSKL 335
                 .|.::.:|.:|.           ..|:.::.|.|..:.......:|          :..:
plant   104 -----EDEKSCIDLVLTEVDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAV 163

  Fly   336 DSSIQPGLDRKIEISN--QEM--PAHSL-----YPSLFK-----SITMKSDQKSKAMSGSSHSQF 386
            |..::|  .||.|:.|  |.:  ..||:     .|.|.|     .:.|:......:.|||.....
plant   164 DFLVKP--IRKNELKNLWQHVWRRCHSVRVLIWLPVLQKLLCVFFLLMRLLIYQSSGSGSESGIH 226

  Fly   387 DSKLQKDSDIEKYENLQQQLETAAVLMD-----------ISKKIVISPPCSNPQSPCFSAAVDTS 440
            |.|..|....:..||       .|.:.|           :|.:...|...|..||.....|.|| 
plant   227 DKKSVKPESTQGSEN-------DASISDEHRNESGSSGGLSNQDGGSDNGSGTQSSWTKRASDT- 283

  Fly   441 IKSSVIKSKRPSNQ----------------------------NEIQDGVEIDLSVKKQKNDYSN- 476
                  ||..||||                            .:|..|.:..:|:.|:..:..: 
plant   284 ------KSTSPSNQFPDAPNKKGTYENGCAHVNRLKEAEDQKEQIGTGSQTGMSMSKKAEEPGDL 342

  Fly   477 QRNAAPIHHFCQTPMLDIQSHLRSEEDFQNYSITINQVGGSDFKSKAPKASTGSLLDSGDSSDSH 541
            ::||          ...:|:..|:.:|..|.|     .|.|..:||||         |.:..|..
plant   343 EKNA----------KYSVQALERNNDDTLNRS-----SGNSQVESKAP---------SSNREDLQ 383

  Fly   542 KLEMDITSSINDR--KTPDSLSSDHATDAATTQLWQALARSAAKSKEDNPASQIFRNMMSQPFAF 604
            .||..:..:..||  |..|.....|:..:|.:: :...|.||.|:.|:|..|       ..|...
plant   384 SLEQTLKKTREDRDYKVGDRSVLRHSNLSAFSK-YNNGATSAKKAPEENVES-------CSPHDS 440

  Fly   605 PVPSTVSFTKVPEEPIALLKDLS---------EAQSSKSKPCRRKQSFPTK 646
            |:...:..:...:.|   ||..|         ||...|.:..|:::.|..|
plant   441 PIAKLLGSSSSSDNP---LKQQSSGSDRWAQREAALMKFRLKRKERCFEKK 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAdNP_609383.2 zf-AD <228..284 CDD:214871 11/56 (20%)
GAT1 625..>742 CDD:227928 7/31 (23%)
ZnF_GATA 691..742 CDD:238123
PRR3NP_001190575.1 psREC_PRR 66..169 CDD:381120 19/140 (14%)
MSCRAMM_ClfA <233..454 CDD:468110 54/266 (20%)
CCT 469..511 CDD:461849 6/20 (30%)
Blue background indicates that the domain is not in the aligned region.

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