DRSC/TRiP Functional Genomics Resources

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Protein Alignment GATAd and GATA4

DIOPT Version :10

Sequence 1:NP_609383.2 Gene:GATAd / 34395 FlyBaseID:FBgn0032223 Length:842 Species:Drosophila melanogaster
Sequence 2:NP_191612.1 Gene:GATA4 / 825224 AraportID:AT3G60530 Length:240 Species:Arabidopsis thaliana


Alignment Length:263 Identity:64/263 - (24%)
Similarity:94/263 - (35%) Gaps:92/263 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   556 TPDSLSSDHATDAATTQLWQ------ALARSAAKSKEDNPASQIFRNMMSQPFAFP--------- 605
            :||.|..|...|.:..:::.      :.|.|:|.|.|:             ||:||         
plant     8 SPDLLRIDDLLDFSNDEIFSSSSTVTSSAASSAASSEN-------------PFSFPSSTYTSPTL 59

  Fly   606 ---------VPS-------------TVSFTKVPEEPIALLKDLSEAQSSKSKPCRRKQSFPTKTD 648
                     |||             ..||:..|..|:.:  .:....|...||..|:...|.   
plant    60 LTDFTHDLCVPSDDAAHLEWLSRFVDDSFSDFPANPLTM--TVRPEISFTGKPRSRRSRAPA--- 119

  Fly   649 CIDVVNENVTDTYTT--------SEATPDDKKDKRNINLFNA----IPGAQKDMSCSNCGTLTTT 701
                  .:|..|:..        |.|.|..||      ::||    ..||::   |::|.:..|.
plant   120 ------PSVAGTWAPMSESELCHSVAKPKPKK------VYNAESVTADGARR---CTHCASEKTP 169

  Fly   702 IWRRSVRG-EMVCNACGLYFK---LHGVNRPHSMRRD--TIHTR-RRRPKELERSKKKHKQMSSC 759
            .||....| :.:|||||:.:|   |....||.|....  |.|:. .|:..||.|.|   :|..||
plant   170 QWRTGPLGPKTLCNACGVRYKSGRLVPEYRPASSPTFVLTQHSNSHRKVMELRRQK---EQQESC 231

  Fly   760 SSI 762
            ..|
plant   232 VRI 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAdNP_609383.2 zf-AD <228..284 CDD:214871
GAT1 625..>742 CDD:227928 34/135 (25%)
ZnF_GATA 691..742 CDD:238123 18/57 (32%)
GATA4NP_191612.1 ZnF_GATA 158..207 CDD:214648 16/51 (31%)
Blue background indicates that the domain is not in the aligned region.

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