DRSC/TRiP Functional Genomics Resources

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Protein Alignment GATAd and GATA1

DIOPT Version :10

Sequence 1:NP_609383.2 Gene:GATAd / 34395 FlyBaseID:FBgn0032223 Length:842 Species:Drosophila melanogaster
Sequence 2:NP_189047.1 Gene:GATA1 / 821990 AraportID:AT3G24050 Length:274 Species:Arabidopsis thaliana


Alignment Length:318 Identity:63/318 - (19%)
Similarity:110/318 - (34%) Gaps:108/318 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 GGHRAVMFNRLTGIKEKVYPEGTHFMVPWFERPIIYD-VRARPYLVESTTGSHDLQMVKIGLRVL 104
            |||:.::|:::....:                 |:.| :..:.||.|...|.....:.:..:...
plant  1200 GGHKVLIFSQMVRCLD-----------------ILEDYLMHKRYLYERIDGRVRGNLRQAAIDRF 1247

  Fly   105 TRPMGDRLPQIYRT----LGENYSERVLPSIIHET-------LKAVVAQYNASQ--------LIT 150
            ::|..||...:..|    ||.|.: .....||.::       |:|....:...|        |||
plant  1248 SKPDSDRFVFLLCTRAGGLGINLT-AADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLIT 1311

  Fly   151 QREAVSREIRKILTERASNFDIALDDVSITTLTFGKEFTAA----IEAKQ------------VAA 199
             |.:..||    :.:||| ..:.||...:.::: |:|.:..    :..|:            :..
plant  1312 -RNSYERE----MFDRAS-LKLGLDKAVLQSMS-GRENSVGGIQQLSKKEIEDLLRRGAYGAIMD 1369

  Fly   200 QEAERAKFIVEKAEQ--DRRSAVIRAQGE-------------------------------AKSAQ 231
            :|.|.:||..|..:|  .||:..|..:.|                               ||.|:
plant  1370 EEDEGSKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAE 1434

  Fly   232 LIGQAIANNQAFITLRKIEAAREIAQTIAQSANKVYLSSNDLLLNLQEMNLE----PK 285
            :...:::...:.:    |:..|...||...||.|      |.|..|.|...|    ||
plant  1435 IDIDSVSGRNSLV----IDTPRIRKQTRPFSATK------DELAELSEAESEGEDKPK 1482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAdNP_609383.2 zf-AD <228..284 CDD:214871 14/59 (24%)
GAT1 625..>742 CDD:227928
ZnF_GATA 691..742 CDD:238123
GATA1NP_189047.1 ZnF_GATA 193..243 CDD:214648
Blue background indicates that the domain is not in the aligned region.

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