DRSC/TRiP Functional Genomics Resources

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Protein Alignment GATAd and ZML1

DIOPT Version :10

Sequence 1:NP_609383.2 Gene:GATAd / 34395 FlyBaseID:FBgn0032223 Length:842 Species:Drosophila melanogaster
Sequence 2:NP_566676.1 Gene:ZML1 / 821670 AraportID:AT3G21175 Length:297 Species:Arabidopsis thaliana


Alignment Length:330 Identity:62/330 - (18%)
Similarity:110/330 - (33%) Gaps:108/330 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   488 QTPMLDIQSHLRSEE------DFQNYSITINQVGGSD--FKSKAPK------ASTGSLLDSG-DS 537
            |.||     |::.|:      |.:|..:..:..||.|  .::..|.      .:.|.::|.| ::
plant    17 QNPM-----HVQYEDHGLHHIDNENSMMDDHADGGMDEGVETDIPSHPGNSADNRGEVVDRGIEN 76

  Fly   538 SDSHKLEMDITSSINDRKTPD--------------------SLSSDHATD-----------AATT 571
            .|...|.......:.||.:|:                    :|.|.|..:           .:..
plant    77 GDQLTLSFQGQVYVFDRVSPEKVQAVLLLLGGREVPHTLPTTLGSPHQNNRVLGLSGTPQRLSVP 141

  Fly   572 QLWQALARSAAKSKEDNPASQIFRNMMSQPFAFPVPSTVSFTKVPEEPIALLKDLSEAQSSKSKP 636
            |...:|.|...|.|..|                 ...|:.:|...|..:.:.:...:..|:||. 
plant   142 QRLASLLRFREKRKGRN-----------------FDKTIRYTVRKEVALRMQRKKGQFTSAKSS- 188

  Fly   637 CRRKQSFPTKTDCIDVVNENVTDTYTTSEATPDDKKDKRNINLFNAIPGAQ---KDMSCSNCGT- 697
                             |::       |.:|..|....::.    |:.|.:   .::.|.:||| 
plant   189 -----------------NDD-------SGSTGSDWGSNQSW----AVEGTETQKPEVLCRHCGTS 225

  Fly   698 -LTTTIWRRSVRG-EMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPKELERSKKKHKQMSSCS 760
             .:|.:.||...| ..:||||||.:...|..|..|.....     :.|:.|..:|.:...:.:..
plant   226 EKSTPMMRRGPDGPRTLCNACGLMWANKGTLRDLSKVPPP-----QTPQHLSLNKNEDANLEADQ 285

  Fly   761 SIETT 765
            .:|.|
plant   286 MMEVT 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAdNP_609383.2 zf-AD <228..284 CDD:214871
GAT1 625..>742 CDD:227928 26/122 (21%)
ZnF_GATA 691..742 CDD:238123 17/53 (32%)
ZML1NP_566676.1 TIFY 73..108 CDD:198047 6/34 (18%)
CCT 143..186 CDD:461849 9/59 (15%)
ZnF_GATA 219..268 CDD:238123 17/53 (32%)
Blue background indicates that the domain is not in the aligned region.

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