DRSC/TRiP Functional Genomics Resources

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Protein Alignment GATAd and RR13

DIOPT Version :10

Sequence 1:NP_609383.2 Gene:GATAd / 34395 FlyBaseID:FBgn0032223 Length:842 Species:Drosophila melanogaster
Sequence 2:NP_001318296.1 Gene:RR13 / 817249 AraportID:AT2G27070 Length:572 Species:Arabidopsis thaliana


Alignment Length:652 Identity:117/652 - (17%)
Similarity:211/652 - (32%) Gaps:225/652 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KFRQVCRLCL--------TLVNE---CDVAVLQIYDNSSHNNSAPDRISADFRGVANRANCFCSA 60
            |:|::..:.:        ||.|:   .|:.:...|....:......:|:.:|      .|.....
plant    39 KYREITVIAVDYPKKALSTLKNQRDNIDLIITDYYMPGMNGLQLKKQITQEF------GNLSVLV 97

  Fly    61 LSPNPCSCIVDNPLSANKNERR-NQGTPVPVPIPI-PVSVP----VPVPSQQIQSQTLHHHQNQT 119
            :|.:|           ||.|.. :.|....:|.|| |..:|    ..:..::....||...|||.
plant    98 MSSDP-----------NKEEESLSCGAMGFIPKPIAPTDLPKIYQFALTYKRNGKSTLSTEQNQK 151

  Fly   120 KIHYTPSVPSAADAKSSERERQCQLESDIAERSTVFKSQSSSDHEHIEYSGETPSPSASLSQSQT 184
            ..:.  |||           :|..|   :.|::.|.|::..:                ..|:|.|
plant   152 DANV--SVP-----------QQIML---VPEQAYVLKTKKKN----------------CSSKSDT 184

  Fly   185 KSEPMREEEEHQHNHNQQSGREETSVNTTNISGTDNYGKEHGR---------DDSSS-------- 232
            :                       :||:||:|.....|....|         ||..|        
plant   185 R-----------------------TVNSTNVSHVSTNGSRKNRKRKPKGGPSDDGESLSQPPKKK 226

  Fly   233 ----------------PHLTFQIFNCLSIKALPNDGLPNVVCGDCRQKLDSFEKF-RTMAHNSQI 280
                            .|:.:.......|.|:.|  :|.:...:....|..:..| :.:.|..:.
plant   227 KIWWTNPLQDLFLQAIQHIGYDKVVPKKILAIMN--VPYLTRENVASHLQKYRLFVKRVVHQGRF 289

  Fly   281 AL-----KEFLNISKNLR--------PDPNDLETKLDAILKASSEAI--AAKALTELS---TFSK 327
            ::     |:.:....:::        |..:..||.|:. ....||::  .::.|:|..   .:::
plant   290 SMLSDRGKDSMFRQTHIKEPYVNYYTPSTSWYETSLNN-RSFYSESVHGHSRLLSEAREPVRYNQ 353

  Fly   328 VKYDHSKLDSSIQ---------------PGLDRKIEISNQEMPAHSLYPSLFKSITMKSDQKSKA 377
            :.|::...:.|.:               |.:..||..::|.:....|.||........::..|..
plant   354 MSYNYMNRNISFENQPSQNEETRTVFEPPVMANKISQTSQVLGFGQLGPSAISGHNFNTNMMSSY 418

  Fly   378 MS------GSSHSQFDSKLQKDSDIEKYE-----------NLQQ--QLETAAVLMDISKKIVISP 423
            .|      |:||..:..:...:::...|.           ||.:  |||...:..|:.....:..
plant   419 GSLTPNQPGTSHFSYGMQSVLNNENATYNPQPPANATTQPNLDELPQLENLNLYNDLGNTSELPY 483

  Fly   424 PCSNPQSPCFSAAVDTSIKSSVIKSKRPSNQNEIQDGVEIDLSVKKQKNDYSNQRNAAPIHHFCQ 488
            ..||.||       |.:.|           |.| :||   |.:......|.||..::..|    .
plant   484 NISNFQS-------DDNKK-----------QGE-EDG---DWTFVNINQDQSNGESSNTI----A 522

  Fly   489 TPMLDIQSHLRSEEDFQNYSITINQVGGSDFKSKAPKASTGSLLDSGDSSDSHKLEMDITSSI-- 551
            ||          |.:..|::|..||..|    ...|:.:..|.||..:..|.     |..:|:  
plant   523 TP----------ETNTPNFNINPNQNQG----QAVPEFTDWSFLDQQELVDD-----DFMNSLFN 568

  Fly   552 ND 553
            ||
plant   569 ND 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAdNP_609383.2 zf-AD <228..284 CDD:214871 11/85 (13%)
GAT1 625..>742 CDD:227928
ZnF_GATA 691..742 CDD:238123
RR13NP_001318296.1 REC 19..120 CDD:381085 17/97 (18%)
myb_SHAQKYF 225..280 CDD:130620 6/56 (11%)
Blue background indicates that the domain is not in the aligned region.

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