DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GATAd and grn

DIOPT Version :10

Sequence 1:NP_609383.2 Gene:GATAd / 34395 FlyBaseID:FBgn0032223 Length:842 Species:Drosophila melanogaster
Sequence 2:XP_061498140.1 Gene:grn / 3290975 VectorBaseID:AGAMI1_007281 Length:564 Species:Anopheles gambiae


Alignment Length:90 Identity:45/90 - (50%)
Similarity:58/90 - (64%) Gaps:6/90 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   672 KDKRNINLFNAIPGAQK--DMSCSNCGTLTTTIWRRSVRGEMVCNACGLYFKLHGVNRPHSMRRD 734
            |.||  .|.:::..|.:  ..||:||.|.|||:|||:..||.||||||||:|||.||||.:|:::
Mosquito   377 KPKR--RLVSSLQSAARRAGTSCANCKTTTTTLWRRNQGGEPVCNACGLYYKLHNVNRPLTMKKE 439

  Fly   735 TIHTRRRRPKELERSKKKHKQMSSC 759
            .|.||.|  |...:||||.....||
Mosquito   440 GIQTRNR--KLSSKSKKKKGIPGSC 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAdNP_609383.2 zf-AD <228..284 CDD:214871
GAT1 625..>742 CDD:227928 37/71 (52%)
ZnF_GATA 691..742 CDD:238123 32/50 (64%)
grnXP_061498140.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.