DRSC/TRiP Functional Genomics Resources

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Protein Alignment GATAd and Gata6

DIOPT Version :10

Sequence 1:NP_609383.2 Gene:GATAd / 34395 FlyBaseID:FBgn0032223 Length:842 Species:Drosophila melanogaster
Sequence 2:NP_062058.2 Gene:Gata6 / 29300 RGDID:2666 Length:587 Species:Rattus norvegicus


Alignment Length:255 Identity:80/255 - (31%)
Similarity:116/255 - (45%) Gaps:46/255 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   601 PFAFPVPSTVSF-----TKVPEEPIA-LLKDLSEAQSSKSKPCRRKQSFPT---KTDCIDVVNEN 656
            ||..||..::..     ..||..|.| ||:||||     |:.|....|..|   :.|.......|
  Rat   347 PFETPVLHSLQSRAGAPLPVPRGPSADLLEDLSE-----SRECVNCGSIQTPLWRRDGTGHYLCN 406

  Fly   657 VTDTYTTSE--ATPDDKKDKRNINLFNAIPGAQK-DMSCSNCGTLTTTIWRRSVRGEMVCNACGL 718
            ....|:...  :.|..|..||       :|.::: .:||:||.|.|||:|||:..||.|||||||
  Rat   407 ACGLYSKMNGLSRPLIKPQKR-------VPSSRRLGLSCANCHTTTTTLWRRNAEGEPVCNACGL 464

  Fly   719 YFKLHGVNRPHSMRRDTIHTRRRRPKELERSKKKHKQMSSCSSIETTKQDFLTARESLAISGLVL 783
            |.|||||.||.:|:::.|.||:|:||.:.:|    |..|..||:..|.....:..:...      
  Rat   465 YMKLHGVPRPLAMKKEGIQTRKRKPKNINKS----KACSGNSSVPMTPTSSSSNSDDCT------ 519

  Fly   784 NKFKKEIDDTETPAAAALKDILSRRKKSNSLPAFNDTCES--------ADLSAPLNLVSS 835
               |.....|::.|:.....::|...:|.: |..:|...|        ..||:|..:.||
  Rat   520 ---KNTSPPTQSTASGVGASVMSAVGESAN-PENSDLKYSGQDGLYIGVSLSSPAEVTSS 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAdNP_609383.2 zf-AD <228..284 CDD:214871
GAT1 625..>742 CDD:227928 48/122 (39%)
ZnF_GATA 691..742 CDD:238123 32/50 (64%)
Gata6NP_062058.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 17..73
GATA-N 147..371 CDD:461628 6/23 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 209..259
ZnF_GATA 383..428 CDD:238123 10/51 (20%)
GAT1 <437..>582 CDD:227928 54/153 (35%)
ZnF_GATA 437..488 CDD:238123 32/50 (64%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 480..532 15/64 (23%)
Blue background indicates that the domain is not in the aligned region.

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