DRSC/TRiP Functional Genomics Resources

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Protein Alignment GATAd and GATA3

DIOPT Version :9

Sequence 1:NP_001260326.1 Gene:GATAd / 34395 FlyBaseID:FBgn0032223 Length:842 Species:Drosophila melanogaster
Sequence 2:NP_001002295.1 Gene:GATA3 / 2625 HGNCID:4172 Length:444 Species:Homo sapiens


Alignment Length:420 Identity:107/420 - (25%)
Similarity:154/420 - (36%) Gaps:122/420 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   423 PPCSNPQSPCFSAAVDTSIKSSVIKSKRPSNQNEIQDGVEIDLSVKKQKND----YSNQRNAA-- 481
            |...|.|.|      ||. ...:..|...:.|..:.:.|::..::..|.|.    |.|...|.  
Human    16 PAVLNGQHP------DTH-HPGLSHSYMDAAQYPLPEEVDVLFNIDGQGNHVPPYYGNSVRATVQ 73

  Fly   482 ---PIHH---FCQTPMLD------------IQSHLRSEEDFQNYSITINQVGGSDFKSKAPKAST 528
               |.||   .|:.|:|.            ...|..|..:...:|.|....|.....|..|.||:
Human    74 RYPPTHHGSQVCRPPLLHGSLPWLDGGKALGSHHTASPWNLSPFSKTSIHHGSPGPLSVYPPASS 138

  Fly   529 GSLLDSGDSSDSHKLEMDIT------------------SSINDRK--------TPDS--LSSDHA 565
            .||  ||..:..|......|                  |:..|.|        .|||  |.|.|:
Human   139 SSL--SGGHASPHLFTFPPTPPKDVSPDPSLSTPGSAGSARQDEKECLKYQVPLPDSMKLESSHS 201

  Fly   566 TDAATTQLWQALARSAAKSKEDNPASQIFRNMMSQPFAFPVPSTVSFTKVPEEPIALLKDLSEAQ 630
            ..:.|       |...|.|...:|.:           .:| |....::.....|.:||.......
Human   202 RGSMT-------ALGGASSSTHHPIT-----------TYP-PYVPEYSSGLFPPSSLLGGSPTGF 247

  Fly   631 SSKSKPCRRKQSFPTKTDCIDVVNENVTDTYTTSEATPDDKKDKRNINLFNA------IPGAQKD 689
            ..||:|..|     :.|:..:.||...|       :||..::|.....|.||      :.|..:.
Human   248 GCKSRPKAR-----SSTEGRECVNCGAT-------STPLWRRDGTGHYLCNACGLYHKMNGQNRP 300

  Fly   690 M---------------SCSNCGTLTTTIWRRSVRGEMVCNACGLYFKLHGVNRPHSMRRDTIHTR 739
            :               ||:||.|.|||:|||:..|:.||||||||:|||.:|||.:|:::.|.||
Human   301 LIKPKRRLSAARRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNINRPLTMKKEGIQTR 365

  Fly   740 RRRPKELERSKKKHKQMSSCSSIETTKQDF 769
            .|  |...:|||       |..:..:.:||
Human   366 NR--KMSSKSKK-------CKKVHDSLEDF 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAdNP_001260326.1 zf-AD <228..284 CDD:214871
ZnF_GATA 688..736 CDD:214648 27/62 (44%)
ZnF_GATA 691..742 CDD:238123 30/50 (60%)
GATA3NP_001002295.1 Interaction with TBX21. /evidence=ECO:0000250|UniProtKB:P23772 1..258 58/274 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29 6/19 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 128..180 11/53 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..216 7/28 (25%)
ZnF_GATA 260..307 CDD:214648 10/53 (19%)
ZnF_GATA 263..313 CDD:238123 10/56 (18%)
Flexible linker 289..317 1/27 (4%)
ZnF_GATA 313..362 CDD:214648 27/48 (56%)
ZnF_GATA 317..367 CDD:238123 30/49 (61%)
YxKxHxxxRP. /evidence=ECO:0000250 345..354 5/8 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 362..390 11/34 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 415..444
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165141004
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5641
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000130
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.740

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