DRSC/TRiP Functional Genomics Resources

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Protein Alignment GATAd and GATA2

DIOPT Version :9

Sequence 1:NP_001260326.1 Gene:GATAd / 34395 FlyBaseID:FBgn0032223 Length:842 Species:Drosophila melanogaster
Sequence 2:NP_001139133.1 Gene:GATA2 / 2624 HGNCID:4171 Length:480 Species:Homo sapiens


Alignment Length:433 Identity:103/433 - (23%)
Similarity:149/433 - (34%) Gaps:150/433 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   479 NAAPIHH--------FCQTPMLDIQSHLRSEEDFQNYSITINQVGGSDFKSKAPKASTGSLLDSG 535
            :||..||        |.:||:               :.......||.  .|..|.|..||...||
Human   106 SAAAAHHHNPWTVSPFSKTPL---------------HPSAAGGPGGP--LSVYPGAGGGSGGGSG 153

  Fly   536 DS----------SDSHKLEMDITSSINDRKTPDSLSSDHATDAATTQLWQALARSAA-------- 582
            .|          |.||......|       .|..:|.|.:|..|.:....:...|||        
Human   154 SSVASLTPTAAHSGSHLFGFPPT-------PPKEVSPDPSTTGAASPASSSAGGSAARGEDKDGV 211

  Fly   583 ----------KSKEDNPASQIFRNMMSQPFA-FPVPSTVSFTKVPEEPIALLKDLSEA------- 629
                      |.:..:|.......|.:||.. .|:|:..|:  ||    |...|.|..       
Human   212 KYQVSLTESMKMESGSPLRPGLATMGTQPATHHPIPTYPSY--VP----AAAHDYSSGLFHPGGF 270

  Fly   630 -----------QSSKSKPCRRKQSFPTKTDCIDVVNENVTDTYTTSEATPDDKKDKRNINLFNA- 682
                       |.||::.|...:      :|   ||...|       |||..::|.....|.|| 
Human   271 LGGPASSFTPKQRSKARSCSEGR------EC---VNCGAT-------ATPLWRRDGTGHYLCNAC 319

  Fly   683 -----IPGAQKDM---------------SCSNCGTLTTTIWRRSVRGEMVCNACGLYFKLHGVNR 727
                 :.|..:.:               .|:||.|.|||:|||:..|:.||||||||:|||.|||
Human   320 GLYHKMNGQNRPLIKPKRRLSAARRAGTCCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNVNR 384

  Fly   728 PHSMRRDTIHTRRRRPKELERSKKKHKQMSSCSSIETTKQDFLTARESLAISGLVLNKFKKEIDD 792
            |.:|:::.|.||.|:   :....||.|:.:.|                       ..:..|.:.:
Human   385 PLTMKKEGIQTRNRK---MSNKSKKSKKGAEC-----------------------FEELSKCMQE 423

  Fly   793 TETPAAAALKDILSRRKKSNSLPAFNDTCESADLSAPLNLVSS 835
            ..:|.:||.  :.........||.|:.:........|::..||
Human   424 KSSPFSAAA--LAGHMAPVGHLPPFSHSGHILPTPTPIHPSSS 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAdNP_001260326.1 zf-AD <228..284 CDD:214871
ZnF_GATA 688..736 CDD:214648 27/62 (44%)
ZnF_GATA 691..742 CDD:238123 30/50 (60%)
GATA2NP_001139133.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 119..209 25/113 (22%)
ZnF_GATA 294..344 CDD:238123 12/59 (20%)
ZnF_GATA 349..398 CDD:238123 30/48 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 448..480 3/17 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165140993
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5641
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000130
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.740

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