DRSC/TRiP Functional Genomics Resources

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Protein Alignment GATAd and fep1

DIOPT Version :9

Sequence 1:NP_001260326.1 Gene:GATAd / 34395 FlyBaseID:FBgn0032223 Length:842 Species:Drosophila melanogaster
Sequence 2:NP_592936.1 Gene:fep1 / 2541522 PomBaseID:SPAC23E2.01 Length:564 Species:Schizosaccharomyces pombe


Alignment Length:283 Identity:71/283 - (25%)
Similarity:111/283 - (39%) Gaps:86/283 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   495 QSHLR--SEEDFQNYSITINQV------GGSDFKSKAPKASTGSLLDSGDSSDSHKLEMDITSSI 551
            :.|.|  ..||.::.|..|.||      .|..|.:    .:.||...:|..:.::::.     |:
pombe    43 RKHARPVKSEDLKDISPLIQQVCKNGTCAGDGFCN----GTGGSASCTGCPALNNRIR-----SL 98

  Fly   552 NDRKTPDSLSSDHATDAATTQLWQALARSAAKSKEDNPASQIFRNMMSQPFAFPVPSTVSFTKVP 616
            |..|                      ::|..||...||:|              |||:.. ||..
pombe    99 NASK----------------------SQSGRKSLSPNPSS--------------VPSSTE-TKAS 126

  Fly   617 EEPIALLKDLSEAQSSKSKPCRRKQSFPTKTDCIDVVNENVTDTYTTSEATPDDKKDKRNINLFN 681
            ..|:            :|||                  :.|:||.|.:......::...|.:..:
pombe   127 PTPL------------ESKP------------------QIVSDTTTETSNGTSRRRSSHNQHEDS 161

  Fly   682 AIPGAQKDMSCSNCGTLTTTIWRRSVRGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPKEL 746
            :.|.......|.||.|..|.:|||...|..:|||||||:|:|||:||.:|::..|..|:|.....
pombe   162 SPPHEPSVTFCQNCATTNTPLWRRDESGNPICNACGLYYKIHGVHRPVTMKKAIIKRRKRLVFNG 226

  Fly   747 ERSKKKH--KQMSSCSSIETTKQ 767
            ..::.:|  |:|||..|..:.||
pombe   227 NANESQHNLKRMSSGDSGSSVKQ 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAdNP_001260326.1 zf-AD <228..284 CDD:214871
ZnF_GATA 688..736 CDD:214648 23/47 (49%)
ZnF_GATA 691..742 CDD:238123 25/50 (50%)
fep1NP_592936.1 ZnF_GATA 11..57 CDD:238123 4/13 (31%)
GAT1 16..555 CDD:227928 71/283 (25%)
ZnF_GATA 171..222 CDD:238123 25/50 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5641
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000130
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10071
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

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