DRSC/TRiP Functional Genomics Resources

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Protein Alignment GATAd and gaf1

DIOPT Version :10

Sequence 1:NP_609383.2 Gene:GATAd / 34395 FlyBaseID:FBgn0032223 Length:842 Species:Drosophila melanogaster
Sequence 2:NP_588278.2 Gene:gaf1 / 2539024 PomBaseID:SPCC1902.01 Length:855 Species:Schizosaccharomyces pombe


Alignment Length:857 Identity:178/857 - (20%)
Similarity:285/857 - (33%) Gaps:261/857 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 SAADAKSSERERQCQLESDIAERSTVFKSQSSSDH--EHIEY--------SGETPSPSASLSQSQ 183
            |..|..||:.:....  ||:.:..:..||:.|:..  |::.:        ...||:..::.....
pombe    24 STTDESSSKEDYSTM--SDLWKMFSKAKSELSNGRRVENLTWRLMSINLQKNLTPNGDSNTLTPD 86

  Fly   184 TKSEPMREEEEHQHNHNQQSGREETSVNTTNISGTDNYGKEHGRDDSSSPHLTFQIFNCLSIKAL 248
            |.|:|....       :.||....:|..||    .||...|                  :.:..:
pombe    87 TFSDPTAPS-------SAQSVPPTSSAETT----ADNSDTE------------------MKLNPI 122

  Fly   249 PNDGLPNVVCGDC---------RQKLDSFEKFRTMAHNSQIALKEFLNISKNLRPDPNDLETKLD 304
            |...:|....|..         |.:..||::....:....||...|        ||||.::...|
pombe   123 PAYSVPADTTGSSLMEFNYIQRRVRKTSFDESTAKSKKRSIADSHF--------PDPNAMQRPHD 179

  Fly   305 AILKASSEAIAAKALTELSTFSKVKYDHSKLDSSIQPGLDRK-IEISNQ----EMPAHSLYPSLF 364
                ..|:..:...:...::|:.||.|   :|||....||.. :.||..    .:.:|:| |:..
pombe   180 ----LESQPFSYPKIHASNSFNFVKRD---IDSSNFSNLDASALPISPPSDFFSVHSHNL-PNAP 236

  Fly   365 KSITMKS------DQKSKAMSGSSHSQFDSKLQKDSDIEKYENLQQQLETAAVLMDISKKIVISP 423
            .||...|      :|:.||          |....|:|:                :.:...:..|.
pombe   237 PSIPANSNNSASPNQRIKA----------SPKHADTDV----------------LGLDFDMTPSE 275

  Fly   424 PCSNPQSPCFSAAVDTSIKSSVIKSKRPSNQNEIQD---GVEIDLSVKK--------QKNDYSNQ 477
            |.|.|::..|.:.||.:.....:.....:|....:.   |..|..||..        .::.:|:.
pombe   276 PSSFPENGGFPSFVDANTHEQTLFPSSATNSFSFEHGSAGFPIPGSVPSTSYHANTASEDGFSSS 340

  Fly   478 RNAAPIHHFCQ------TP----MLDIQSHLRSEEDFQNYSI---------------TINQVGGS 517
            .|:..:.....      ||    ..|:..:...:....|:.:               :||.|...
pombe   341 YNSQGLFGISSPLSSGVTPNQSFFPDVSGNNIFDVSRNNHEVSSPLIQSPGSYVSMPSINMVSSL 405

  Fly   518 DFKSKAPKAS-----------TGSLLDSGDSSDSHKLEMDITSSINDRKTPDSLSSDHATDAA-- 569
            ...:..|.::           |.|....|..|.......:...|.|     .|:||.::.:.|  
pombe   406 PISAPVPNSNSQFPRRPNTFRTNSSKSVGQGSSGVDSNQENAESFN-----PSISSHNSAEWASG 465

  Fly   570 -TT-------------------QLWQALARSAAKSKEDNPASQIF-------------------- 594
             ||                   ::..|:..:..:|...|...|.|                    
pombe   466 ETTGHSSNSPLPGSDMFSPQFMRVGTAMGVAPVRSNSSNNFGQNFFHQTSPQFSAVPHRKVSAQD 530

  Fly   595 RNMMS--------QPFAFPVPSTVSFTK---VPEEPIALLKDLSEAQSSKSKPCRRKQSFPTKTD 648
            .|:|.        .|:.....|..|.|.   :||...|.||  ....::.:.|   :.:.||..|
pombe   531 TNLMGSSPGMYNHMPYLNRATSANSITSPGVLPEGMAASLK--KRTTNTAATP---QAALPTTLD 590

  Fly   649 CID------VVNENVTDTYTTSEATPDDKKD--KRNINLFNAIPGAQKDMSCSNCGTLTTTIWRR 705
            ...      .:|:| .:..|.|.|..|.|.|  .|..|..|..|      :|:||.|.||.:|||
pombe   591 TKKDRSVSFNINKN-AEKPTVSNAAEDKKGDANTRRANATNPTP------TCTNCQTRTTPLWRR 648

  Fly   706 SVRGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRR------RPKEL-ERSKKKHKQMSSCSSIE 763
            |..|:.:||||||:.|::||.||.|::.|.|..|.|      .||:. .|.....|..|..||.:
pombe   649 SPDGQPLCNACGLFMKINGVVRPLSLKTDVIKKRNRGVGTSATPKQSGGRKGSTRKSSSKSSSAK 713

  Fly   764 TTKQDFLTARESLAISGLVLNKFKKEIDDTETPAAAALKDILSRRKKSNSLPAFNDTCESADLSA 828
            :|..|.....:|.:||                |........||    |..:|.      ...:.:
pombe   714 STAADMKPKADSKSIS----------------PGFVGGNQSLS----SERIPL------DPSMRS 752

  Fly   829 PLNLVSSENNAK 840
            ||...||||.:|
pombe   753 PLQQQSSENESK 764

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAdNP_609383.2 zf-AD <228..284 CDD:214871 8/64 (13%)
GAT1 625..>742 CDD:227928 43/130 (33%)
ZnF_GATA 691..742 CDD:238123 27/56 (48%)
gaf1NP_588278.2 DUF1752 41..67 CDD:430068 4/25 (16%)
GAT1 183..841 CDD:227928 140/655 (21%)

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