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Protein Alignment GATAd and med-1
DIOPT Version :9
Sequence 1: | NP_001260326.1 |
Gene: | GATAd / 34395 |
FlyBaseID: | FBgn0032223 |
Length: | 842 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001366746.1 |
Gene: | med-1 / 191705 |
WormBaseID: | WBGene00003180 |
Length: | 174 |
Species: | Caenorhabditis elegans |
Alignment Length: | 160 |
Identity: | 41/160 - (25%) |
Similarity: | 52/160 - (32%) |
Gaps: | 39/160 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 590 ASQIFRNMMSQ----PFAFPVPSTVSFTK---------------VPEEPIALLKDLSEAQSSKSK 635
|..:|.|...| .::.|...|.|||. ....|.|: |.|....|.:.
Worm 10 AENVFDNTQQQVGFYDYSTPFNGTYSFTTDYSYYNNYYDYVNTYASYYPTAM--DSSSLNISSTT 72
Fly 636 PCRRKQSFPTKTDCIDVVNENVTDTYTTSEATPDDKKDKRNINLFNAIPGAQKDMSCSNCGTLTT 700
.......|.|.|.. ........|.|.|..||.:..:| |...||||....|
Worm 73 GSPNSSHFTTFTHF--STPSTSPSTSTQSSTTPSNSDNK-------------KSFQCSNCSVTET 122
Fly 701 TIWR--RSVRGEMVCNACGLYFKLHGVNRP 728
..|| ||..| :.||||.:|.:.:...||
Worm 123 IRWRNIRSKEG-IQCNACFIYQRKYNKTRP 151
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5641 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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