DRSC/TRiP Functional Genomics Resources

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Protein Alignment GATAd and Gata6

DIOPT Version :10

Sequence 1:NP_609383.2 Gene:GATAd / 34395 FlyBaseID:FBgn0032223 Length:842 Species:Drosophila melanogaster
Sequence 2:XP_017173323.1 Gene:Gata6 / 14465 MGIID:107516 Length:590 Species:Mus musculus


Alignment Length:172 Identity:64/172 - (37%)
Similarity:89/172 - (51%) Gaps:31/172 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   601 PFAFPVPSTV-----SFTKVPEEPIA-LLKDLSEAQSSKSKPCRRKQSFPT---KTDCIDVVNEN 656
            ||..||..::     :...||..|.. ||:||||     |:.|....|..|   :.|.......|
Mouse   347 PFETPVLHSLQGRAGAPLPVPRGPSTDLLEDLSE-----SRECVNCGSIQTPLWRRDGTGHYLCN 406

  Fly   657 VTDTYTTSE--ATPDDKKDKRNINLFNAIPGAQK-DMSCSNCGTLTTTIWRRSVRGEMVCNACGL 718
            ....|:...  :.|..|..||       :|.::: .:||:||.|.|||:|||:..||.|||||||
Mouse   407 ACGLYSKMNGLSRPLIKPQKR-------VPSSRRLGLSCANCHTTTTTLWRRNAEGEPVCNACGL 464

  Fly   719 YFKLHGVNRPHSMRRDTIHTRRRRPKELERSKKKHKQMSSCS 760
            |.|||||.||.:|:::.|.||:|:||.:.:||       :||
Mouse   465 YMKLHGVPRPLAMKKEGIQTRKRKPKNINKSK-------ACS 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAdNP_609383.2 zf-AD <228..284 CDD:214871
GAT1 625..>742 CDD:227928 48/122 (39%)
ZnF_GATA 691..742 CDD:238123 32/50 (64%)
Gata6XP_017173323.1 GATA-N 147..371 CDD:461628 6/23 (26%)
ZnF_GATA 383..428 CDD:238123 10/51 (20%)
ZnF_GATA 437..488 CDD:238123 32/50 (64%)
Blue background indicates that the domain is not in the aligned region.

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