DRSC/TRiP Functional Genomics Resources

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Protein Alignment GATAd and Gata5

DIOPT Version :9

Sequence 1:NP_001260326.1 Gene:GATAd / 34395 FlyBaseID:FBgn0032223 Length:842 Species:Drosophila melanogaster
Sequence 2:NP_032119.2 Gene:Gata5 / 14464 MGIID:109497 Length:404 Species:Mus musculus


Alignment Length:131 Identity:52/131 - (39%)
Similarity:68/131 - (51%) Gaps:31/131 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   690 MSCSNCGTLTTTIWRRSVRGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPKELERSK---- 750
            :.||||.|.|||:|||:..||.||||||||.|||||.||.:|::::|.||:|:||...:.|    
Mouse   248 LCCSNCHTATTTLWRRNSEGEPVCNACGLYMKLHGVPRPLAMKKESIQTRKRKPKNPAKIKGSSG 312

  Fly   751 ----------------------KKHKQMSS--CSSIETTKQDFLTARESLAISGLVLNKFKKEID 791
                                  |....::|  |:....|.|....|.||||.|.|   :||.|.:
Mouse   313 STANTTASSPTLLNSESSATTLKAESSLASPVCAGPTITSQASSPADESLASSHL---EFKFEPE 374

  Fly   792 D 792
            |
Mouse   375 D 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAdNP_001260326.1 zf-AD <228..284 CDD:214871
ZnF_GATA 688..736 CDD:214648 29/45 (64%)
ZnF_GATA 691..742 CDD:238123 32/50 (64%)
Gata5NP_032119.2 GATA-N 1..181 CDD:368398
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 71..112
ZnF_GATA 195..239 CDD:238123
ZnF_GATA 250..300 CDD:238123 32/49 (65%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 293..332 7/38 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5641
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000130
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10071
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

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