DRSC/TRiP Functional Genomics Resources

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Protein Alignment GATAd and Gata3

DIOPT Version :10

Sequence 1:NP_609383.2 Gene:GATAd / 34395 FlyBaseID:FBgn0032223 Length:842 Species:Drosophila melanogaster
Sequence 2:NP_032117.1 Gene:Gata3 / 14462 MGIID:95663 Length:443 Species:Mus musculus


Alignment Length:423 Identity:107/423 - (25%)
Similarity:157/423 - (37%) Gaps:129/423 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   423 PPCSNPQSPCFSAAVDT---SIKSSVIKSKRPSNQNEIQDGVEIDLSVKKQKND----YSNQRNA 480
            |...|.|.|      ||   .:..|.::::.|     :.:.|::..::..|.|.    |.|...|
Mouse    16 PAVLNGQHP------DTHHPGLGHSYMEAQYP-----LTEEVDVLFNIDGQGNHVPSYYGNSVRA 69

  Fly   481 A-----PIHH---FCQTPMLD------------IQSHLRSEEDFQNYSITINQVGGSDFKSKAPK 525
            .     |.||   .|:.|:|.            ...|..|..:...:|.|....|.....|..|.
Mouse    70 TVQRYPPTHHGSQVCRPPLLHGSLPWLDGGKALSSHHTASPWNLSPFSKTSIHHGSPGPLSVYPP 134

  Fly   526 ASTGSLLDSGDSSDSHKLEMDIT------------------SSINDRK--------TPDS--LSS 562
            ||:.||. :|.|| .|......|                  |:..|.|        .|||  |.:
Mouse   135 ASSSSLA-AGHSS-PHLFTFPPTPPKDVSPDPSLSTPGSAGSARQDEKECLKYQVQLPDSMKLET 197

  Fly   563 DHATDAATTQLWQALARSAAKSKEDNPASQIFRNMMSQPFAFPVPSTVSFTKVPEEPIALLKDLS 627
            .|:..:.||       ...|.|...:|.:           .:| |....::.....|.:||....
Mouse   198 SHSRGSMTT-------LGGASSSAHHPIT-----------TYP-PYVPEYSSGLFPPSSLLGGSP 243

  Fly   628 EAQSSKSKPCRRKQSFPTKTDCIDVVNENVTDTYTTSEATPDDKKDKRNINLFNA------IPGA 686
            .....||:|..|     :.|:..:.||...|       :||..::|.....|.||      :.|.
Mouse   244 TGFGCKSRPKAR-----SSTEGRECVNCGAT-------STPLWRRDGTGHYLCNACGLYHKMNGQ 296

  Fly   687 QKDM---------------SCSNCGTLTTTIWRRSVRGEMVCNACGLYFKLHGVNRPHSMRRDTI 736
            .:.:               ||:||.|.|||:|||:..|:.||||||||:|||.:|||.:|:::.|
Mouse   297 NRPLIKPKRRLSAARRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNINRPLTMKKEGI 361

  Fly   737 HTRRRRPKELERSKKKHKQMSSCSSIETTKQDF 769
            .||.|  |...:|||       |..:....:||
Mouse   362 QTRNR--KMSSKSKK-------CKKVHDALEDF 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAdNP_609383.2 zf-AD <228..284 CDD:214871
GAT1 625..>742 CDD:227928 45/137 (33%)
ZnF_GATA 691..742 CDD:238123 30/50 (60%)
Gata3NP_032117.1 Interaction with TBX21. /evidence=ECO:0000269|PubMed:15662016 1..257 58/277 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28 6/17 (35%)
PHA03377 <76..260 CDD:177614 45/209 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 143..180 7/37 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 193..214 6/27 (22%)
ZnF_GATA 262..312 CDD:238123 10/56 (18%)
Flexible linker. /evidence=ECO:0000250 288..316 1/27 (4%)
ZnF_GATA 316..366 CDD:238123 30/49 (61%)
YxKxHxxxRP 344..353 5/8 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 412..443
Blue background indicates that the domain is not in the aligned region.

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