DRSC/TRiP Functional Genomics Resources

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Protein Alignment MSGN1 and Msgn1

DIOPT Version :10

Sequence 1:NP_001099039.1 Gene:MSGN1 / 343930 HGNCID:14907 Length:193 Species:Homo sapiens
Sequence 2:NP_062417.1 Gene:Msgn1 / 56184 MGIID:1860483 Length:188 Species:Mus musculus


Alignment Length:193 Identity:149/193 - (77%)
Similarity:160/193 - (82%) Gaps:7/193 - (3%)


- Green bases have known domain annotations that are detailed below.


Human     1 MDNLRETFLSLEDGLGSSDSPGLLSSWDWKDRAGPFELNQASPSQSLSPAPSLESYSSSPCPAVA 65
            ||||.||||||||||.|||:.|||:|||||.||.|.||.|.||:|||||||||||||.      .
Mouse     1 MDNLGETFLSLEDGLDSSDTAGLLASWDWKSRARPLELVQESPTQSLSPAPSLESYSE------V 59

Human    66 GLPCEHGGASSGGSEGCSVGGASGLVEVDYNMLAFQPTHLQGGGGPKAQKGTKVRMSVQRRRKAS 130
            .|||.|.|||:|||:|.....|:||||:||:||||||.:|...||.|.|||:||:||||||||||
Mouse    60 ALPCGHSGASTGGSDGYGSHEAAGLVELDYSMLAFQPPYLHTAGGLKGQKGSKVKMSVQRRRKAS 124

Human   131 EREKLRMRTLADALHTLRNYLPPVYSQRGQPLTKIQTLKYTIKYIGELTDLLN-RGREPRAQS 192
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| .|||||.||
Mouse   125 EREKLRMRTLADALHTLRNYLPPVYSQRGQPLTKIQTLKYTIKYIGELTDLLNSSGREPRPQS 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MSGN1NP_001099039.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 34..59 19/24 (79%)
bHLH_TS_Msgn1 118..183 CDD:381509 63/64 (98%)
Msgn1NP_062417.1 bHLH_TS_Msgn1 112..177 CDD:381509 63/64 (98%)

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