DRSC/TRiP Functional Genomics Resources

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Protein Alignment MSGN1 and hlh-14

DIOPT Version :10

Sequence 1:NP_001099039.1 Gene:MSGN1 / 343930 HGNCID:14907 Length:193 Species:Homo sapiens
Sequence 2:NP_495131.3 Gene:hlh-14 / 182758 WormBaseID:WBGene00001958 Length:148 Species:Caenorhabditis elegans


Alignment Length:74 Identity:22/74 - (29%)
Similarity:38/74 - (51%) Gaps:3/74 - (4%)


- Green bases have known domain annotations that are detailed below.


Human   121 MSVQRRRKASEREKLRMRTLADALHTLRNYLPPVYSQRGQPLTKIQTLKYTIKYIGELTDLLNRG 185
            |:.:.:...:|||:.|:..:......|||.|.|  ....:..:|..||:..:|||.:|..|||:.
 Worm     1 MAKKNQVARNERERKRVHQVNHGFDVLRNRLQP--KNHTKKWSKADTLREAVKYIQQLQVLLNQD 63

Human   186 -REPRAQSA 193
             ::|...|:
 Worm    64 PQQPSVSSS 72

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MSGN1NP_001099039.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 34..59
bHLH_TS_Msgn1 118..183 CDD:381509 18/61 (30%)
hlh-14NP_495131.3 HLH 7..57 CDD:459628 15/51 (29%)
Blue background indicates that the domain is not in the aligned region.

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