DRSC/TRiP Functional Genomics Resources

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Protein Alignment Schip1 and zgc:153615

DIOPT Version :9

Sequence 1:NP_001334735.1 Gene:Schip1 / 34393 FlyBaseID:FBgn0032221 Length:621 Species:Drosophila melanogaster
Sequence 2:NP_001071259.1 Gene:zgc:153615 / 777747 ZFINID:ZDB-GENE-061110-79 Length:258 Species:Danio rerio


Alignment Length:255 Identity:63/255 - (24%)
Similarity:117/255 - (45%) Gaps:45/255 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   373 KQIEKKRRFNRDEIRKRLAIGDKDSLNNDIKKEEFLTGSDNESYSSDSETC--PKLSSGVLRKQS 435
            |.:.:.:|..|:.||::||:|   |..:|  .:...||.     |...:.|  .:|.:||   ..
Zfish     6 KCVYQAQRNERESIRQKLALG---SFYDD--GQITFTGC-----SKSGKNCLSSRLQNGV---NL 57

  Fly   436 EFCETKRNKEFENDKIFQKNQINQD---------------KSMNHMNGNPIGTTDYPSDENLFFF 485
            :.|       |.||....::...:|               |..:.::....|..|..|::: .|:
Zfish    58 QMC-------FVNDSSSDRDSDAEDSRTETSLDTPLSPMSKQSSSLSDRDTGEEDLDSEDS-EFW 114

  Fly   486 ANQSKLQIEVRIALAQSKEIAQMKVKARK----HGVTPIVDVIRSMLCDVGIKMNSNHRWISRQL 546
            ..|.:||.|.|:|||.::.:|:|:|:..:    |..:|:.|::..:.......|..|.|.:.   
Zfish   115 RLQRRLQEEARVALALARPMARMQVEVERQIQIHRRSPVADLLPHLPHISECLMKRNLRPVD--- 176

  Fly   547 LTGIQVPTLQLLVNNLQEYIENLNVTLLESLKERDDLNSDQDDILHDLEKINNFFVFQQQ 606
            :..:.:..||::.|:|...|:.||..|::.|..||:|:.:||.:|.|:|.:......||:
Zfish   177 MRDMSLGQLQVITNDLHSQIQGLNEELVQLLLMRDELHMEQDAMLVDVEDLTRHAHSQQR 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Schip1NP_001334735.1 None
zgc:153615NP_001071259.1 SCHIP-1 12..239 CDD:287158 62/249 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595941
Domainoid 1 1.000 64 1.000 Domainoid score I10139
eggNOG 1 0.900 - - E1_KOG4847
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003916
OrthoInspector 1 1.000 - - otm25942
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13103
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
87.800

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