DRSC/TRiP Functional Genomics Resources

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Protein Alignment RnrL and RNR3

DIOPT Version :10

Sequence 1:NP_477027.1 Gene:RnrL / 34392 FlyBaseID:FBgn0011703 Length:812 Species:Drosophila melanogaster
Sequence 2:NP_012198.3 Gene:RNR3 / 854744 SGDID:S000001328 Length:869 Species:Saccharomyces cerevisiae


Alignment Length:868 Identity:495/868 - (57%)
Similarity:640/868 - (73%) Gaps:70/868 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LYVIKRDGRQEEVHFDKITSRIQKLCYNLNMDFVDPVTITLQVINGLYCGVTTQELDNLAAEIAA 76
            :||||||||:|.|.||||||||.:|.|.|:.:.:|.|.:|.::|:|:|.||||.||||||||..|
Yeast     1 MYVIKRDGRKEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLAAETCA 65

  Fly    77 GLTCNHPDYAILAARIAVSNLHKETKKAFSDVFEDLYNHVNKETNQKVPLVSEFHYNVVKKNATR 141
            .:|..|||||.||||||:|||||:|.|.||.|.|||::.:|..|.:..|::|:..||:|.:|...
Yeast    66 YMTTVHPDYATLAARIAISNLHKQTTKQFSKVIEDLHDWINPATGKHAPMISDEIYNIVMENKDT 130

  Fly   142 LNSSIIYDRDFGYNYFGFKTLERSYLLKRNGKIAERPQHMLMRVAIGIHGEDIDAAVETYNLLSE 206
            |||:|:|||||.|.|||||||||||||:.||::||||||::||||:||||.||::.::||||:|.
Yeast   131 LNSAIVYDRDFQYTYFGFKTLERSYLLRLNGEVAERPQHLVMRVALGIHGSDIESVLKTYNLMSL 195

  Fly   207 RYFTHASPTLFAAATNRPQLSSCFLLTMTADSIEGIFKSVEQCAMISKSAGGIGLNVHCIRAKGT 271
            |||||||||||.|.|..||:|||||:.|..||||||:.::::||||||:|||:||:::.||:.|:
Yeast   196 RYFTHASPTLFNAGTPHPQMSSCFLIAMKDDSIEGIYDTLKECAMISKTAGGVGLHINNIRSTGS 260

  Fly   272 SICGTNGTSNGLVPMLRVFNNVARYVDQGGGKRPGAFAIYLEPWHSDVFEFLELKKNTGKEENRA 336
            .|.|||||||||:||:|||||.||||||||.|||||||::|||||:|:|:|::::|..||||.||
Yeast   261 YIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALFLEPWHADIFDFVDIRKTHGKEEIRA 325

  Fly   337 RDLFYALWIPDLFMKRVEANGDWSLMCPHKCPGLHDVWGDEFEKLYEKYEQEGRANRTVKAQSLW 401
            ||||.||||||||||||:.:|.|:|..|...|||.||||||||:||.:||:||| .:|:|||.||
Yeast   326 RDLFPALWIPDLFMKRVQEDGPWTLFSPSAAPGLDDVWGDEFEELYTRYEREGR-GKTIKAQKLW 389

  Fly   402 FAIIEAQVETGNPYMLFKDACNRKSNQQNVGTIKCSNLCTEIVEYSAPDEIAVCNLASIALNMFV 466
            :||::||.|||.|:|::|||||||:||||:||||.||||.||||||:|||.||||||||||..||
Yeast   390 YAILQAQTETGTPFMVYKDACNRKTNQQNLGTIKSSNLCCEIVEYSSPDETAVCNLASIALPAFV 454

  Fly   467 TPEK-----TYDFKKLKEVTKIVTKNLNKIIDINYYPLPEARKSNLRHRPVGIGIQGFADALILM 526
            ...:     :|:|::|.|:.|::|.|||::||.||||:||||.||::|||:.:|:||.||..:::
Yeast   455 EVSEDGKTASYNFERLHEIAKVITHNLNRVIDRNYYPVPEARNSNMKHRPIALGVQGLADTYMML 519

  Fly   527 RFPYESEEAGLLNQQIFETIYYGALEASCELAQTEGPYETYEGSPVSKGILQYDMWDKVPTNLWD 591
            |.|:|||||..||:|||||||:..|||||||||.||.|.|:||||.||||||:|||:..|..:||
Yeast   520 RLPFESEEAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPASKGILQFDMWNAKPFGMWD 584

  Fly   592 WQKLKESIRMHGVRNSLLVAPMPTASTAQIMGNNESFEPYTTNIYTRRVLSGEFQVVNHHLLRDL 656
            |:.|::.|..||:||||.:||||||||:||:|.||.|||.|:|:|:||||||||||||.:|||||
Yeast   585 WETLRKDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYLLRDL 649

  Fly   657 TELDLWDDDMKNQIISSRGSIQNIETIPPKVRDLYKTVWEISVKSTIKMAADRGAFIDQSQSFNI 721
            .:|.:|||.||..:|:..||||.:..:|.::::|||||||||.|:.|.|||||..:||||.|.|:
Yeast   650 VDLGIWDDSMKQYLITQNGSIQGLPNVPQELKELYKTVWEISQKTIINMAADRAIYIDQSHSLNL 714

  Fly   722 HVAEPNYGKLTSIHFYSWKAGLKTGMYYLRTKPAANAIQFTVNK--------------------- 765
            .:..|:.||:||:|||.||.|||||||||||:.|:.|||||:::                     
Yeast   715 FLQAPSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQEVADQAATHIASVSELDRPVY 779

  Fly   766 -------------------------------KQGAVSMNGQNGTAEGS------PQKYEEDRERK 793
                                           :|.:||....|...|.|      .:..:||.:.|
Yeast   780 VPKGTKFSEQKAASALTESSDNEKDASPVPSEQSSVSSAMSNVKLEDSVAPAVPTETIKEDSDEK 844

  Fly   794 MAD------MVCSLENKDACMSC 810
            ..|      :.|:....:||.||
Yeast   845 KCDIYNEKVIACTAPTPEACESC 867

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RnrLNP_477027.1 PLN02437 12..812 CDD:178056 495/868 (57%)
RNR3NP_012198.3 PLN02437 1..775 CDD:178056 480/774 (62%)

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