DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RnrL and RNR1

DIOPT Version :9

Sequence 1:NP_477027.1 Gene:RnrL / 34392 FlyBaseID:FBgn0011703 Length:812 Species:Drosophila melanogaster
Sequence 2:NP_179770.1 Gene:RNR1 / 816715 AraportID:AT2G21790 Length:816 Species:Arabidopsis thaliana


Alignment Length:820 Identity:520/820 - (63%)
Similarity:649/820 - (79%) Gaps:23/820 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LYVIKRDGRQEEVHFDKITSRIQKLCYNLNMDFVDPVTITLQVINGLYCGVTTQELDNLAAEIAA 76
            :||:|||||||.|||||||:|::||.|.|:.|..|||.:..:|..|:|.||||.:||.||||.||
plant     1 MYVVKRDGRQETVHFDKITARLKKLSYGLSSDHCDPVLVAQKVCAGVYKGVTTSQLDELAAETAA 65

  Fly    77 GLTCNHPDYAILAARIAVSNLHKETKKAFSDVFEDLYNHVNKETNQKVPLVSEFHYNVVKKNATR 141
            .:||||||||.||||||||||||.|||:||:..:|::.|||..:..|.||:::..:.::.:||.|
plant    66 AMTCNHPDYASLAARIAVSNLHKNTKKSFSETIKDMFYHVNDRSGLKSPLIADDVFEIIMQNAAR 130

  Fly   142 LNSSIIYDRDFGYNYFGFKTLERSYLLKRNGKIAERPQHMLMRVAIGIHGEDIDAAVETYNLLSE 206
            |:|.|||||||.|:||||||||||||||..|.:.|||||||||||:|||.:|||:.::||:|:|:
plant   131 LDSEIIYDRDFEYDYFGFKTLERSYLLKVQGTVVERPQHMLMRVAVGIHKDDIDSVIQTYHLMSQ 195

  Fly   207 RYFTHASPTLFAAATNRPQLSSCFLLTMTADSIEGIFKSVEQCAMISKSAGGIGLNVHCIRAKGT 271
            |:|||||||||.|.|.|||||||||:.|..||||||::::::||:|||||||||::||.|||.|:
plant   196 RWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGS 260

  Fly   272 SICGTNGTSNGLVPMLRVFNNVARYVDQGGGKRPGAFAIYLEPWHSDVFEFLELKKNTGKEENRA 336
            .|.||||||||:||||||||:.|||||||||||.||||:||||||:||:|||||:||.||||:||
plant   261 YIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADVYEFLELRKNHGKEEHRA 325

  Fly   337 RDLFYALWIPDLFMKRVEANGDWSLMCPHKCPGLHDVWGDEFEKLYEKYEQEGRANRTVKAQSLW 401
            ||||||||:|||||:||:.||.|||.||::.|||.|.||.|||.||.|||:||:|.:.|:||.||
plant   326 RDLFYALWLPDLFMERVQNNGQWSLFCPNEAPGLADCWGAEFETLYTKYEREGKAKKVVQAQQLW 390

  Fly   402 FAIIEAQVETGNPYMLFKDACNRKSNQQNVGTIKCSNLCTEIVEYSAPDEIAVCNLASIALNMFV 466
            :.|:.:|||||.|||||||:|||||||||:||||.|||||||:||::|.|.||||||||||..||
plant   391 YEILTSQVETGTPYMLFKDSCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFV 455

  Fly   467 -------------------TPEKTYDFKKLKEVTKIVTKNLNKIIDINYYPLPEARKSNLRHRPV 512
                               :..:.:||:||.|||..||.|||||||:||||:..|:.||:||||:
plant   456 REKGVPLDSHPPKLAGSLDSKNRYFDFEKLAEVTATVTVNLNKIIDVNYYPVETAKTSNMRHRPI 520

  Fly   513 GIGIQGFADALILMRFPYESEEAGLLNQQIFETIYYGALEASCELAQTEGPYETYEGSPVSKGIL 577
            |||:||.|||.||:..|::|.||..||:.|||||||.||:||.|||...||||||.|||||||||
plant   521 GIGVQGLADAFILLGMPFDSPEAQQLNKDIFETIYYHALKASTELAARLGPYETYAGSPVSKGIL 585

  Fly   578 QYDMWDKVPTNLWDWQKLKESIRMHGVRNSLLVAPMPTASTAQIMGNNESFEPYTTNIYTRRVLS 642
            |.|||:.:|::.|||..|::.|..:||||||||||||||||:||:||||.|||||:|||:|||||
plant   586 QPDMWNVIPSDRWDWAVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLS 650

  Fly   643 GEFQVVNHHLLRDLTELDLWDDDMKNQIISSRGSIQNIETIPPKVRDLYKTVWEISVKSTIKMAA 707
            |||.|||.|||.|||::.||...:||::|:..|||.|:..||..::.:|:|||||..::.:.|||
plant   651 GEFVVVNKHLLHDLTDMGLWTPTLKNKLINENGSIVNVAEIPDDLKAIYRTVWEIKQRTVVDMAA 715

  Fly   708 DRGAFIDQSQSFNIHVAEPNYGKLTSIHFYSWKAGLKTGMYYLRTKPAANAIQFTVNKKQGAVSM 772
            |||.:||||||.|||:.:||:.||||:|||:||.||||||||||::.||:||:|||:    ...:
plant   716 DRGCYIDQSQSLNIHMDKPNFAKLTSLHFYTWKKGLKTGMYYLRSRAAADAIKFTVD----TAML 776

  Fly   773 NGQNGTAEGSPQKYEEDRERKMADMVCSLENKDACMSCGS 812
            ..:...|||..:..|||.|.|:|.|||||.|.:.|::|||
plant   777 KEKPSVAEGDKEVEEEDNETKLAQMVCSLTNPEECLACGS 816

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RnrLNP_477027.1 PLN02437 12..812 CDD:178056 518/818 (63%)
RNR1NP_179770.1 PLN02437 1..816 CDD:178056 518/818 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 724 1.000 Domainoid score I13
eggNOG 1 0.900 - - E1_COG0209
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H806
Inparanoid 1 1.050 1076 1.000 Inparanoid score I31
OMA 1 1.010 - - QHG62381
OrthoDB 1 1.010 - - D156716at2759
OrthoFinder 1 1.000 - - FOG0003792
OrthoInspector 1 1.000 - - oto2979
orthoMCL 1 0.900 - - OOG6_100448
Panther 1 1.100 - - LDO PTHR11573
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2647
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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