DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RnrL and cdc22

DIOPT Version :9

Sequence 1:NP_477027.1 Gene:RnrL / 34392 FlyBaseID:FBgn0011703 Length:812 Species:Drosophila melanogaster
Sequence 2:NP_594491.1 Gene:cdc22 / 2541695 PomBaseID:SPAC1F7.05 Length:811 Species:Schizosaccharomyces pombe


Alignment Length:820 Identity:535/820 - (65%)
Similarity:661/820 - (80%) Gaps:28/820 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LYVIKRDGRQEEVHFDKITSRIQKLCYNLNMDFVDPVTITLQVINGLYCGVTTQELDNLAAEIAA 76
            ::|.|||||||:|.|||||:|:.:|||.|:.|.||||.||.:||:|:|.||||.||||||||.||
pombe     1 MFVYKRDGRQEKVAFDKITARVSRLCYGLDSDHVDPVEITQKVISGVYPGVTTIELDNLAAETAA 65

  Fly    77 GLTCNHPDYAILAARIAVSNLHKETKKAFSDVFEDLYNHVNKETNQKVPLVSEFHYNVVKKNATR 141
            .:|..||||||||||||||||||:|:|.||.|.:.|:::||.:|::..|::|:..|::|.|:...
pombe    66 TMTTKHPDYAILAARIAVSNLHKQTEKVFSTVVQQLHDYVNPKTDKPAPMISDKIYDIVMKHKDE 130

  Fly   142 LNSSIIYDRDFGYNYFGFKTLERSYLLKRNGKIAERPQHMLMRVAIGIHGEDIDAAVETYNLLSE 206
            |:|:|||||||.||:||||||||||||:.:||:|||||||:||||:|||||||:||:|||||:|:
pombe   131 LDSAIIYDRDFTYNFFGFKTLERSYLLRIDGKVAERPQHMIMRVAVGIHGEDIEAAIETYNLMSQ 195

  Fly   207 RYFTHASPTLFAAATNRPQLSSCFLLTMTADSIEGIFKSVEQCAMISKSAGGIGLNVHCIRAKGT 271
            |||||||||||.|.|.|||||||||:||..||||||:.:::.||||||:|||||:|:|.|||.|:
pombe   196 RYFTHASPTLFNAGTPRPQLSSCFLVTMKDDSIEGIYDTLKMCAMISKTAGGIGINIHNIRATGS 260

  Fly   272 SICGTNGTSNGLVPMLRVFNNVARYVDQGGGKRPGAFAIYLEPWHSDVFEFLELKKNTGKEENRA 336
            .|.||||||||:|||:||:||.||||||||.|||||||.||||||:||.:||||:|..|.|:.||
pombe   261 YIAGTNGTSNGIVPMIRVYNNTARYVDQGGNKRPGAFAAYLEPWHADVMDFLELRKTHGNEDFRA 325

  Fly   337 RDLFYALWIPDLFMKRVEANGDWSLMCPHKCPGLHDVWGDEFEKLYEKYEQEGRANRTVKAQSLW 401
            |::|||||||||||:|||.|..|:..||::.|||.|||||||..||||||:|.|..|::.||.:|
pombe   326 REMFYALWIPDLFMQRVERNEQWTFFCPNEAPGLADVWGDEFVALYEKYEKENRGRRSLPAQKVW 390

  Fly   402 FAIIEAQVETGNPYMLFKDACNRKSNQQNVGTIKCSNLCTEIVEYSAPDEIAVCNLASIALNMFV 466
            :||:::|||||||:||:||:|||||||:|||||:||||||||||||:|||:|||||||:||..|:
pombe   391 YAILQSQVETGNPFMLYKDSCNRKSNQKNVGTIRCSNLCTEIVEYSSPDEVAVCNLASVALPTFI 455

  Fly   467 TPEKTYDFKKLKEVTKIVTKNLNKIIDINYYPLPEARKSNLRHRPVGIGIQGFADALILMRFPYE 531
            ...| |:|:||.:|.|:||:|||||||:||||:||||:||:||||||:|:||.|||...:|.|:|
pombe   456 KDGK-YNFQKLHDVVKVVTRNLNKIIDVNYYPVPEARRSNMRHRPVGLGVQGLADAFFALRLPFE 519

  Fly   532 SEEAGLLNQQIFETIYYGALEASCELAQTEGPYETYEGSPVSKGILQYDMWDKVPTNLWDWQKLK 596
            |..|..||.|||||||:.|||||||:||.||.||:|||||.|:||||||||:..||:||||.:||
pombe   520 SAGAKKLNIQIFETIYHAALEASCEIAQVEGTYESYEGSPASQGILQYDMWNVNPTDLWDWAELK 584

  Fly   597 ESIRMHGVRNSLLVAPMPTASTAQIMGNNESFEPYTTNIYTRRVLSGEFQVVNHHLLRDLTELDL 661
            |.|..||:||||||||||||||:||:|.||.|||||:|:|.|||||||||:||..||:||.|.||
pombe   585 EKIAKHGIRNSLLVAPMPTASTSQILGFNECFEPYTSNMYQRRVLSGEFQIVNPWLLKDLVERDL 649

  Fly   662 WDDDMKNQIISSRGSIQNIETIPPKVRDLYKTVWEISVKSTIKMAADRGAFIDQSQSFNIHVAEP 726
            |::||||:::...||||.|..||..::||||||||||.|:.|..|||||.|||||||.|||:.:|
pombe   650 WNEDMKNKLVMLDGSIQAIPEIPQDLKDLYKTVWEISQKTVIDYAADRGPFIDQSQSLNIHLKDP 714

  Fly   727 NYGKLTSIHFYSWKAGLKTGMYYLRTKPAANAIQFTV---------------NKKQGAVSMNGQN 776
            :|||:||:|||.||.|||||||||||..|:.||:|||               |||...     :|
pombe   715 SYGKITSMHFYGWKKGLKTGMYYLRTMAASAAIKFTVDPVALRARNEESNEENKKPVI-----KN 774

  Fly   777 GTAE--GSPQKYEED--RERKMADMVCSLENKDACMSCGS 812
            |.||  ..|.|.|.|  .|:.:|   ||::|.:||..|.:
pombe   775 GKAEISAEPTKEEIDIYNEKVLA---CSIKNPEACEMCSA 811

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RnrLNP_477027.1 PLN02437 12..812 CDD:178056 535/818 (65%)
cdc22NP_594491.1 PLN02437 1..811 CDD:178056 535/818 (65%)
ATP-cone 1..89 CDD:281475 62/87 (71%)
RNR_I 167..740 CDD:153088 403/573 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 766 1.000 Domainoid score I7
eggNOG 1 0.900 - - E1_COG0209
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H806
Inparanoid 1 1.050 1087 1.000 Inparanoid score I25
OMA 1 1.010 - - QHG62381
OrthoFinder 1 1.000 - - FOG0003792
OrthoInspector 1 1.000 - - oto101752
orthoMCL 1 0.900 - - OOG6_100448
Panther 1 1.100 - - LDO PTHR11573
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1104
SonicParanoid 1 1.000 - - X2647
TreeFam 1 0.960 - -
1413.860

Return to query results.
Submit another query.