DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4995 and YMC2

DIOPT Version :10

Sequence 1:NP_609380.1 Gene:CG4995 / 34390 FlyBaseID:FBgn0032219 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_009662.3 Gene:YMC2 / 852401 SGDID:S000000308 Length:329 Species:Saccharomyces cerevisiae


Alignment Length:321 Identity:102/321 - (31%)
Similarity:155/321 - (48%) Gaps:44/321 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 EIGDIQLKATS-----ETFSPKMVVDFVAGLLGGAAGVLVGHPFDTVKVHLQTDDPRNPKYKGTF 82
            |:.| |.|.|:     |..|.:::.|..||.:||.|.||||.||||.||.|||...|..    |.
Yeast    13 ELED-QQKVTTPNEKRELSSNRVLKDIFAGTIGGIAQVLVGQPFDTTKVRLQTATTRTT----TL 72

  Fly    83 HCFRTIVQRDKFIGLYRGISSPMGGIGLVNAIVFGVYGNVQRL------SNDPN----------- 130
            ...|.:|:.:.....|:|..:|:.|:|:..::.|||...::|.      |.:||           
Yeast    73 EVLRNLVKNEGVFAFYKGALTPLLGVGICVSVQFGVNEAMKRFFQNYNASKNPNMSSQDVDLSRS 137

  Fly   131 ---SLTSHFFAGSIAGVAQGFVCAPMELAKTRLQLSTQVDSGIKFTGPIHCLKYIVKTEGIRGAF 192
               .|:.::..|...||...|:.:|:|..:.|||..|......:|.||..|:|.: |.:|  |..
Yeast   138 NTLPLSQYYVCGLTGGVVNSFLASPIEQIRIRLQTQTSNGGDREFKGPWDCIKKL-KAQG--GLM 199

  Fly   193 KGLTATILRDIPGFASYFVSFEYLM-RQVETPGVAYT-------LMAGGCAGMSSWLACYPIDVV 249
            :||..|::|...|..:||:.:|.|: |::.| |:...       .:.|..:|...||..||:|||
Yeast   200 RGLFPTMIRAGHGLGTYFLVYEALVAREIGT-GLTRNEIPPWKLCLFGAFSGTMLWLTVYPLDVV 263

  Fly   250 KTHMQADALGANAKYNGFIDCAMKG-FRNEGPQYFFRGLNSTLIRAFPMNAACFFVVSWVL 309
            |:.:|.|.| ...||...|....|. :..||.:.||:|...|::|:.|:|.|.|.....|:
Yeast   264 KSIIQNDDL-RKPKYKNSISYVAKTIYAKEGIRAFFKGFGPTMVRSAPVNGATFLTFELVM 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4995NP_609380.1 Mito_carr 36..125 CDD:395101 32/88 (36%)
Mito_carr 128..218 CDD:395101 30/104 (29%)
Mito_carr 221..304 CDD:395101 30/90 (33%)
YMC2NP_009662.3 Mito_carr 34..120 CDD:395101 32/89 (36%)
Mito_carr 138..223 CDD:395101 27/87 (31%)
Mito_carr 235..328 CDD:395101 29/90 (32%)

Return to query results.
Submit another query.