DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4995 and CG1907

DIOPT Version :10

Sequence 1:NP_609380.1 Gene:CG4995 / 34390 FlyBaseID:FBgn0032219 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_651703.1 Gene:CG1907 / 43483 FlyBaseID:FBgn0039674 Length:317 Species:Drosophila melanogaster


Alignment Length:304 Identity:71/304 - (23%)
Similarity:126/304 - (41%) Gaps:34/304 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 LKATSETFSPKMVV-----DFVAGLLGGAAGVLVGHPFDTVKVHLQTDDPRNPK--YKGTFHCFR 86
            :.|||...:||..|     .|:.|.|.|....:|..|.|.||..:|.....:.|  |:.:.||.:
  Fly     1 MSATSVQEAPKKAVATNAIKFLFGGLSGMGATMVVQPLDLVKTRMQISGAGSGKKEYRSSLHCIQ 65

  Fly    87 TIVQRDKFIGLYRGISSPMGGIGLVNAIVF-----GVYGNV-----QRLSNDPNSLTSHFFAGSI 141
            |||.::..:.||:||     |..|:....:     |:|..:     ::....| .:|.....|:|
  Fly    66 TIVSKEGPLALYQGI-----GAALLRQATYTTGRLGMYTYLNDLFREKFQRSP-GITDSMAMGTI 124

  Fly   142 AGVAQGFVCAPMELAKTRLQLSTQ--VDSGIKFTGPIHCLKYIVKTEGIRGAFKGLTATI----- 199
            ||....|:..|.|:|..|:....:  |.....:|...:.|..|.:.||:...::|...|:     
  Fly   125 AGACGAFIGTPAEVALVRMTSDGRLPVAERRNYTNVANALARITREEGLTALWRGSLPTVGRAMV 189

  Fly   200 --LRDIPGFASYFVSFEYLMRQVETPGVAYTLMAGGCAGMSSWLACYPIDVVKTHMQ-ADALGAN 261
              :..:..::.:...|.:...|:| .|:.....|...:|:.:.:...|:|:.||.:| ...:...
  Fly   190 VNMTQLASYSQFKTYFRHGPLQME-EGIKLHFCASMLSGLLTTITSMPLDIAKTRIQNMKMVDGK 253

  Fly   262 AKYNGFIDCAMKGFRNEGPQYFFRGLNSTLIRAFPMNAACFFVV 305
            .:|.|..|..::..|.||....::|......|..|.....|.::
  Fly   254 PEYRGTADVLLRVARQEGVFALWKGFTPYYCRLGPHTVLTFIIL 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4995NP_609380.1 Mito_carr 36..125 CDD:395101 28/105 (27%)
Mito_carr 128..218 CDD:395101 20/98 (20%)
Mito_carr 221..304 CDD:395101 19/83 (23%)
CG1907NP_651703.1 Mito_carr 16..109 CDD:395101 25/97 (26%)
Mito_carr 118..207 CDD:395101 18/88 (20%)
Mito_carr 219..307 CDD:395101 17/79 (22%)

Return to query results.
Submit another query.