DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4995 and Bmcp

DIOPT Version :10

Sequence 1:NP_609380.1 Gene:CG4995 / 34390 FlyBaseID:FBgn0032219 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_648501.1 Gene:Bmcp / 39322 FlyBaseID:FBgn0036199 Length:303 Species:Drosophila melanogaster


Alignment Length:309 Identity:74/309 - (23%)
Similarity:118/309 - (38%) Gaps:62/309 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 VVDFVAGLLGGAAGVLV---GHPFDTVKVHLQTDDPR------NPKYKGTFHCFRTIVQRDKFIG 96
            |.|:...:.||.|.:..   ..|.||.|..||....:      ..:|:|....|..|.:.:....
  Fly     4 VKDWRPFVYGGVASITAEFGTFPIDTTKTRLQIQGQKIDQSFSQLRYRGMTDAFVKISREEGLRA 68

  Fly    97 LYRGISSPMGGIGLVNAIVFGVYGNVQRLSNDPNSLT---------SHFFAGSIAGVAQGFVCAP 152
            ||.||...:........|.||.|..:::|:|:...|.         |:....:.||.....:..|
  Fly    69 LYSGIWPAVLRQATYGTIKFGTYYTLKKLANERGLLINEDGSERVWSNILCAAAAGAISSAIANP 133

  Fly   153 MELAKTRLQLSTQVDSGIKFTGPIHCLKYIVKTEGIRGAFKGLTATILRDIPGFASYFVSFEYLM 217
            .::.|.|:    ||....:..|.:.|...|.|.||:||.::|:..|..|.:            ::
  Fly   134 TDVLKVRM----QVHGKGQHKGLLGCFGEIYKYEGVRGLWRGVGPTAQRAV------------VI 182

  Fly   218 RQVETP---------------GVAYTLMAGGCAGMSSWLACYPIDVVKTHMQ------------A 255
            ..||.|               .|....::...|.:.|.:|..||||::|.:.            .
  Fly   183 ASVELPVYDFCKLQLMNAFGDHVGNHFISSFIASLGSAIASTPIDVIRTRLMNQRPVSITMNGVV 247

  Fly   256 DALGANAKYNGFIDCAMKGFRNEGPQYFFRGLNSTLIRAFPMNAACFFV 304
            .|......|:|.:|||::..||||....::|...|.:|..|.| ..||:
  Fly   248 TAAATPKLYSGSLDCAVQTIRNEGLPALYKGFIPTWVRMGPWN-IIFFI 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4995NP_609380.1 Mito_carr 36..125 CDD:395101 23/92 (25%)
Mito_carr 128..218 CDD:395101 20/98 (20%)
Mito_carr 221..304 CDD:395101 27/109 (25%)
BmcpNP_648501.1 Mito_carr 7..97 CDD:395101 21/89 (24%)
Mito_carr <132..199 CDD:395101 19/82 (23%)
Mito_carr 204..303 CDD:395101 26/93 (28%)

Return to query results.
Submit another query.