Protein Alignment CG4995 and Shawn

DIOPT Version :10

• Sequence 1: NP_609380.1
• Gene: CG4995 / 34390
• FlyBaseID: FBgn0032219
• Length: 399
• Species: Drosophila melanogaster
• Sequence 2: NP_001027071.1
• Gene: Shawn / 3772641
• FlyBaseID: FBgn0031039
• Length: 387
• Species: Drosophila melanogaster
• Alignment Length: 321
• Identity: 78/321 - (24%)
• Similarity: 123/321 - (38%)
• Gaps: 95/321 - (29%)

  Fly    60 PFDTVKVHLQT--------------------------DDPR------NPKYKGTFHCFRTIVQRD 92
            |.|.:|..||.                          |.|.      .|::.||...|..|.:.:
  Fly    59 PLDVIKTRLQAQQQALLSNKCFLYCNGLMDHICPCGPDTPNPAAAKPAPRFSGTIDAFIKISRTE 123

  Fly    93 KFIGLYRGISSPMGGIGLVNA-----IVFGVYGNVQRLSND--------PNSLTSH-------FF 137
            ....|:.|:|..     |::|     |.|..|...:....|        |::: :|       |.
  Fly   124 GIGSLWSGLSPT-----LISALPSTIIYFVAYEQFKARFTDIHYKYTRRPDTI-AHDIPHPIPFL 182

  Fly   138 AGSIAGVAQGFVCA-----PMELAKTRLQLSTQVDSGIKFTGPIHCLKYIVKTEGIRGAFKGLTA 197
            ...:|||: |.:.|     |:||.:|::|......:.:..|     ::.:|:::|:.|.::||..
  Fly   183 VPLLAGVS-GRILAVTCVSPVELIRTKMQSQRMTHAEMFGT-----IRQVVQSQGVLGLWRGLPP 241

  Fly   198 TILRDIPGFASYFVSFEYLMRQ--VETPGVAYTLMAGGCAGMSSWLACYPIDVVKTHMQADALGA 260
            |||||:|....|:..:|||...  |..|..:::..||..:|..:.....|.||||||.|.: .|.
  Fly   242 TILRDVPFSGIYWTCYEYLKSSFGVVEPTFSFSFAAGAISGSVAATITTPFDVVKTHEQIE-FGE 305

  Fly   261 NAKYNGFI-------DCAMKG--------FRNEGPQYFFRGLNSTLIRAFPMNAACFFVVS 306
            .     ||       ..|.|.        :|..|....|.||...|.:..|   ||..::|
  Fly   306 K-----FIFSDNPPKQVATKSVAMRLASIYRMGGVPAIFSGLGPRLFKVAP---ACAIMIS 358

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4995	NP_609380.1	Mito_carr	36..125	CDD:395101	20/101 (20%)
		Mito_carr	128..218	CDD:395101	30/109 (28%)
		Mito_carr	221..304	CDD:395101	26/97 (27%)
Shawn	NP_001027071.1	Mito_carr	39..159	CDD:395101	20/104 (19%)
		Mito_carr	178..265	CDD:395101	27/92 (29%)
		Mito_carr	268..371	CDD:395101	27/100 (27%)