DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4995 and dif-1

DIOPT Version :9

Sequence 1:NP_609380.1 Gene:CG4995 / 34390 FlyBaseID:FBgn0032219 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001379917.1 Gene:dif-1 / 177530 WormBaseID:WBGene00000996 Length:312 Species:Caenorhabditis elegans


Alignment Length:283 Identity:102/283 - (36%)
Similarity:158/283 - (55%) Gaps:24/283 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 MVVDFVAGLLGGAAGVLVGHPFDTVKVHLQT----DDPRNPKYKGTFHCFRTIVQRDKFIGLYRG 100
            ::::|:||.:||:..|:||||||||||.:||    .....|::.|...|.:..|.::.|..||:|
 Worm     4 VLLNFIAGGVGGSCTVIVGHPFDTVKVRIQTMPMPKPGEKPQFTGALDCVKRTVSKEGFFALYKG 68

  Fly   101 ISSPMGGIGLVNAIVFG--VYGNVQRLSNDPNSLT--SHFFAGSIAGVAQGFVCAPMELAKTRLQ 161
            :::|:.|:..:.|:.||  ..|...:.::....:|  .:..||::|||....|..|.|..|..||
 Worm    69 MAAPLVGVSPLFAVFFGGCAVGKWLQQTDPSQEMTFIQNANAGALAGVFTTIVMVPGERIKCLLQ 133

  Fly   162 L--STQVDSGIKFTGPIHCLKYIVKTEGIRGAFKGLTATILRDIPGFASYFVSFEYLMRQVE--- 221
            :  :....||:.:.||:..:|.:.|..||...::|..||:|||||..|:|...:|||.::..   
 Worm   134 VQQAGSAGSGVHYDGPLDVVKKLYKQGGISSIYRGTGATLLRDIPASAAYLSVYEYLKKKFSGEG 198

  Fly   222 -----TPGVAYTLMAGGCAGMSSWLACYPIDVVKTHMQADALGANAKY-NGFIDCAMKGFRNEGP 280
                 :||.  ||||||.||:::|..|.|.||:|:.:|....|   || :|......:..|.|||
 Worm   199 AQRTLSPGA--TLMAGGLAGIANWGVCIPADVLKSRLQTAPEG---KYPDGIRGVLREVLREEGP 258

  Fly   281 QYFFRGLNSTLIRAFPMNAACFF 303
            :..|:|....::||||.||||||
 Worm   259 RALFKGFWPVMLRAFPANAACFF 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4995NP_609380.1 Mito_carr 36..125 CDD:278578 32/90 (36%)
PTZ00169 41..295 CDD:240302 93/272 (34%)
Mito_carr 128..218 CDD:278578 33/93 (35%)
Mito_carr 221..304 CDD:278578 37/92 (40%)
dif-1NP_001379917.1 Mito_carr 4..85 CDD:395101 29/80 (36%)
Mito_carr 100..198 CDD:395101 33/97 (34%)
Mito_carr 202..291 CDD:395101 37/85 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54095
OrthoDB 1 1.010 - - D1072378at2759
OrthoFinder 1 1.000 - - FOG0000326
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1756
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.960

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