DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4972 and Ncln

DIOPT Version :9

Sequence 1:NP_609378.1 Gene:CG4972 / 34388 FlyBaseID:FBgn0032217 Length:561 Species:Drosophila melanogaster
Sequence 2:NP_001014104.1 Gene:Ncln / 314648 RGDID:1309355 Length:563 Species:Rattus norvegicus


Alignment Length:584 Identity:204/584 - (34%)
Similarity:300/584 - (51%) Gaps:73/584 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MMNEADSLTE-IFRGGLPHCL---LIVF--SLLLTCSPVMPS-----EFEVISMSKYDLNGQHYG 54
            |:.||..:.| :.:..   ||   .|||  ::||..:|.:|:     ||.|..|.:|||.||.||
  Rat     1 MLEEAGEVLENVLKAS---CLPLGFIVFLPAVLLLVAPPLPAADAAHEFTVYRMQQYDLQGQPYG 62

  Fly    55 SRVASISLEARSLYSWNTSRHCVLTRLTDLSIHDFDK-LRQGAGGLILMLPANILNLDPETKELI 118
            :|.|.::.|||::.:...||.|||.||.|.|...:.| |||.||.::::||..:..:..:.....
  Rat    63 TRNAVLNTEARTVDADVLSRRCVLMRLLDFSYEHYQKALRQSAGAVVIILPRAMAAVPQDVVRQF 127

  Fly   119 TILEQSMLTHTAAVPIYFAPYNKDLEKIIDDITYTTTDSPGQNQTALAQLVV-TVSANRYHINVG 182
            ..:|..||.....||:|||..::.|..|.:.   |...|..|...:.|:::: |.:||.:.:...
  Rat   128 MEIEPEMLAMETVVPVYFAVEDEALLSIYEQ---TQAASASQGSASAAEVLLHTATANGFQMVTS 189

  Fly   183 GGSIAANKNSKIPIIHGELIPNQLALKPTESVADGQKLPVILITANLKTFGIYNDYPVNADA--- 244
            |....|..:..|..:.|.|           :...|:.||.|:|.|:...||:.....:.||:   
  Rat   190 GAQSQAVSDWLITSVEGRL-----------TGLGGEDLPTIVIVAHYDAFGVAPWLSLGADSNGS 243

  Fly   245 --AVLLVLMELFSKLHYTSSMAPKYRLRFLLSDAGVLLNFQGSKKWLE-----VDDNALQ-NVEF 301
              :|||.|..|||:|:........|.|.|..|..| ..|:||:|:|||     .|.:.|| ||.|
  Rat   244 GISVLLELARLFSRLYTYKRTHAAYNLLFFASGGG-KFNYQGTKRWLEDSLDHTDSSLLQDNVAF 307

  Fly   302 VLCLDTISESLSYTTENALYMHVSKPPKDKTSISNFFKLLKSSAEKYSNGLAVEGVHKKINLADT 366
            ||||||:...      :.|.:||||||::.|....|.:.|:..|......::...|||||||||.
  Rat   308 VLCLDTVGRG------SHLRLHVSKPPREGTLQHVFLRELEMVAAHQFPDVSFSMVHKKINLADD 366

  Fly   367 KLAWEHERFSIKRYPSFTLSSVKSPRSPIRTTIFKNDESRLVEHTL-NTTRIIAEALASFMYKV- 429
            .||||||||:|:|.|:||||.:::.|:..|::|. :..||:...|| ..||||||||...:|.: 
  Rat   367 VLAWEHERFAIRRLPAFTLSHLENHRAGPRSSIM-DVRSRVDSKTLTRNTRIIAEALTRVIYNLT 430

  Fly   430 ----DPTSSIFEGQLAIKEENILPYFGVKSILHN---------------NDVKDAFEKYLNNVKI 475
                .|...:|..|:.:::|.|   ..|...|.|               :.::....:||.:|:.
  Rat   431 EKGTPPDMPVFTEQMQVQQEQI---DSVMDWLTNQPRAAQLLDKDGTFLSTLEHFLSRYLKDVRQ 492

  Fly   476 IYDKPDARDPEFMFYNENEVKLNVYRVKPAIFDLFLTFVIGAYLLAVFLAIQYFPRFYDEVSKL 539
            .:.|.|.|||||:||::.:..:|.||||||||||.|...|||||...:.|:|:|...|..|.:|
  Rat   493 HHVKADKRDPEFVFYDQLKQVMNAYRVKPAIFDLLLALCIGAYLGMAYTAVQHFHVLYKTVQRL 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4972NP_609378.1 M28_nicalin_like 121..429 CDD:193503 115/320 (36%)
NclnNP_001014104.1 M28_nicalin_like 130..429 CDD:193503 115/320 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335354
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2526
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10604
Inparanoid 1 1.050 269 1.000 Inparanoid score I2944
OMA 1 1.010 - - QHG60111
OrthoDB 1 1.010 - - D355092at33208
OrthoFinder 1 1.000 - - FOG0004762
OrthoInspector 1 1.000 - - oto96207
orthoMCL 1 0.900 - - OOG6_104880
Panther 1 1.100 - - LDO PTHR31826
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3350
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.770

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