DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Usp14 and UBP6

DIOPT Version :10

Sequence 1:NP_609377.1 Gene:Usp14 / 34387 FlyBaseID:FBgn0032216 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_564596.1 Gene:UBP6 / 841596 AraportID:AT1G51710 Length:482 Species:Arabidopsis thaliana


Alignment Length:497 Identity:189/497 - (38%)
Similarity:282/497 - (56%) Gaps:46/497 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPAFKVKVKWGRELYTDIVVNTDEEPILFKAQLFALTGVQPDRQKVMCKGGILKDD-QW-NLQIK 63
            ||.  |.|||.:::...|.::....|.:|||||:.||||.|:|||:|.|||:|||| .| .:.:|
plant     1 MPT--VSVKWQKKVLDGIEIDVSLPPYVFKAQLYDLTGVPPERQKIMVKGGLLKDDGDWAAIGVK 63

  Fly    64 DGAVVLLLGSKESVPEVPATPVKFIEDMNEAEAATAMRLPAGLTNLGNTCYMNATVQCLNAVPEL 128
            ||..::::|:.:.:.:.|...:.|.||:.|...||.:...|||.|||||||||:|||||.:||||
plant    64 DGQKLMMMGTADEIVKAPEKAIVFAEDLPEEALATNLGYSAGLVNLGNTCYMNSTVQCLKSVPEL 128

  Fly   129 RTALSTFS--NDGTDTMSTAFSISSAMKSIFAQMEKG-TTVTPIVLLQALHRASPQFAQTGENGT 190
            ::|||.:|  ....|...|:..::.|.:.:|.::::. ..|:|......|.:..|||:|. :||.
plant   129 KSALSNYSLAARSNDVDQTSHMLTVATRELFGELDRSVNAVSPSQFWMVLRKKYPQFSQL-QNGM 192

  Fly   191 YRQQDANECWAEILKMLQQKLR-PKNQEPSNTVQKRHSSFIDQFFGGTFEVKMSSEEDPDEPSTV 254
            :.||||.|||.::|..|.|.|: |.:.|.::.|:        ..||...:.::..:|..:|.|  
plant   193 HMQQDAEECWTQLLYTLSQSLKAPTSSEGADAVK--------ALFGVNLQSRLHCQESGEESS-- 247

  Fly   255 TSENFLQLSCFISMDVKYMQSGLKSKMKEQLVKKSETLGRDAKYIRTYLVSRLPAYLTVQFVRFQ 319
            .:|:...|.|.||.:|.::..|||..:|.:|.|.|..|||.|.|::..|:..||.|||||||||.
plant   248 ETESVYSLKCHISHEVNHLHEGLKHGLKGELEKTSPALGRTALYVKESLIDSLPRYLTVQFVRFF 312

  Fly   320 YKGKEGINAKVLKDIKFPIDFDAFELCTPELQNKLCPMRSKFKDLEDKKMEVDVVKRNEPNEEKK 384
            :|.:....||:|:.:.:|:..|.|:||:.:|:.||...|.|.::.|.||:.:....::  ..:..
plant   313 WKRESNQKAKILRKVDYPLVLDIFDLCSEDLRKKLEAPRQKLREEEGKKLGLQTSAKS--GSKDS 375

  Fly   385 DVKYEQFWFDDDLGSNNS---------------------GYYTLQAVLTHKGRSSSSGHYVAWVR 428
            |||..    |.:..:|.|                     |.|.|.|||||||||:.||||||||:
plant   376 DVKMT----DAEASANGSGESSTVNPQEGTSSEKETHMTGIYDLVAVLTHKGRSADSGHYVAWVK 436

  Fly   429 SSGDVWFKFDDDEVSAVATDEILRLSGGGDWHCAYVLLYAPR 470
            .....|.::|||..|....::|.:||||||||.||:.:|..|
plant   437 QESGKWIQYDDDNPSMQREEDITKLSGGGDWHMAYITMYKAR 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp14NP_609377.1 Ubl_USP14_like 4..75 CDD:340521 32/72 (44%)
Peptidase_C19A 105..467 CDD:239122 145/386 (38%)
UBP6NP_564596.1 Ubl_USP14_like 1..75 CDD:340521 34/75 (45%)
Peptidase_C19A 105..476 CDD:239122 145/387 (37%)

Return to query results.
Submit another query.