DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp14 and faf

DIOPT Version :10

Sequence 1:NP_609377.1 Gene:Usp14 / 34387 FlyBaseID:FBgn0032216 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_524612.2 Gene:faf / 43749 FlyBaseID:FBgn0005632 Length:2778 Species:Drosophila melanogaster


Alignment Length:478 Identity:111/478 - (23%)
Similarity:166/478 - (34%) Gaps:161/478 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 VPEVPATPVKFIEDMNEAEAATAMRLPAGLTNLGNTCYMNATVQCLNAVPELRTAL--------- 132
            :|.|.|.|.|..               .||.|.|.|||||:.:|.|..||.:|..:         
  Fly  1656 LPPVGARPTKGF---------------CGLKNAGATCYMNSVLQQLYMVPAVRVGILRAHGAATT 1705

  Fly   133 --STFSND----GTDTMSTAF-----------SISSAMKSIFAQMEKGTTVTPIVLLQAL----- 175
              ..||.|    |....|..|           |.||.::.....:.|...|..:..:||:     
  Fly  1706 DGEDFSGDSDLTGGGLGSALFSGPASALVSLPSSSSTIEDGLHDVRKNYHVVILKHVQAIFAHLG 1770

  Fly   176 HRAS---------PQFAQTGENGTYR-QQDANECWAEILKMLQQKLRPKNQEPSNTVQKRHSSFI 230
            |.|.         ..|...||....| ||||.|.:..:|:.|.:.|:...|          ...:
  Fly  1771 HSALQYYVPRGLWTHFKLLGEPVNLREQQDAVEFFMSLLESLDEGLKALGQ----------PQLM 1825

  Fly   231 DQFFGGTFEVKMSSEEDP-----DEPSTVTSENFLQLSCFISMDVKYMQSGLKSKMKEQLVKKSE 290
            :...||:|..:...:|.|     :||.:|           .|:|::...|..:|  .||.||...
  Fly  1826 NATLGGSFSDQKICQECPHRYSKEEPFSV-----------FSVDIRNHSSLTES--LEQYVKGEL 1877

  Fly   291 TLGRDAKY----------IRTYLVSRLPAYLTVQFVRFQYKGKEGINAKVLKDIKFP--IDFDAF 343
            ..|.||.:          ::...|.:||..|.:|..||:|..:.....|.....:||  :|.:.:
  Fly  1878 LEGADAYHCDKCDKKVVTVKRVCVKKLPPVLAIQLKRFEYDYERVCAIKFNDYFEFPRILDMEPY 1942

  Fly   344 ELCTPELQNKLCPMRSKFKDLEDKKMEV-DVVKRNEPNEEKKDVKYEQFWFDDDLGSNNSGYYTL 407
            .:             |....||.:.:|| |..:.|     .:..|||                 |
  Fly  1943 TV-------------SGLAKLEGEVVEVGDNCQTN-----VETTKYE-----------------L 1972

  Fly   408 QAVLTHKGRSSSSGHYVAWVRSSGDV-----WFKFDDDEVSAVATDEILRLSG---GGD------ 458
            ..::.|.|: :|.|||.:::.|....     |:||||.||:.....|...:..   ||:      
  Fly  1973 TGIVVHSGQ-ASGGHYFSYILSKNPANGKCQWYKFDDGEVTECKMHEDEEMKAECFGGEYMGETY 2036

  Fly   459 --------------WHCAYVLLY 467
                          |..||:|.|
  Fly  2037 DNNLKRMQYRRQKRWWNAYMLFY 2059

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp14NP_609377.1 Ubl_USP14_like 4..75 CDD:340521
Peptidase_C19A 105..467 CDD:239122 105/448 (23%)
fafNP_524612.2 Ubl1_cv_Nsp3_N-like <994..1060 CDD:475130
peptidase_C19C 1666..2064 CDD:239124 106/468 (23%)
DUF3517 2198..2566 CDD:463438
Blue background indicates that the domain is not in the aligned region.

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