DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp14 and Usp1

DIOPT Version :10

Sequence 1:NP_609377.1 Gene:Usp14 / 34387 FlyBaseID:FBgn0032216 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_651687.3 Gene:Usp1 / 43462 FlyBaseID:FBgn0028476 Length:1078 Species:Drosophila melanogaster


Alignment Length:514 Identity:90/514 - (17%)
Similarity:151/514 - (29%) Gaps:208/514 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 LTNLGNTCYMNATVQCLNAVP-------------------------------------------- 126
            |.|:||:||:|:.|..|...|                                            
  Fly   317 LCNIGNSCYLNSVVYTLRFAPHFLHNLHHLIQDLNVVQQTIVRQQTARSASLGKNVSAAQLEHAR 381

  Fly   127 -----ELRTALSTFS---------NDGT-DTMSTAFSISSAMKSIFAQM---EKGTTVTPI---V 170
                 :|.|:...:|         |.|: .:.||..|::..:..::..:   |...:..|.   .
  Fly   382 SWSSKDLATSTDQYSGQNGGVNSGNGGSGSSKSTHQSVTEKLHELYNNLHGNEMADSTEPYHADT 446

  Fly   171 LLQALHRASPQFAQTGENGTYRQQDANECWAEILKMLQQKLRPKNQEPSNTVQKRHSSFIDQFFG 235
            ||.|:...:..|...      :||||:    |.|..:...:|..||.....:.:......:.:..
  Fly   447 LLHAIQDVNATFEGN------QQQDAH----EFLMCVLNCIRETNQSLIKAIGECPEVIANGYIA 501

  Fly   236 GTFEVKMSSEEDPDEP-----------STVTSENFLQLSCFISM------DVKYMQSGLKSKMKE 283
            ...||.....:|..:.           |..||:.....:.|.|.      :||..:|   ::::.
  Fly   502 NPDEVDTGEGQDRTDSTASQNLNAGNGSLATSQTTTTKTSFFSRKSKRKDEVKPSKS---TRVQS 563

  Fly   284 QLVKKSETLG------------RDAKYIRTYLVS-----------------RLPAYLTVQFVRFQ 319
            .|.:.|.|.|            ....|:.|..:|                 ...|.|.......:
  Fly   564 PLKENSPTAGGITGAGTAHATANSLFYLNTVDLSGASSTSGSASTSASGVVSTSAALPTPPQATK 628

  Fly   320 YKGKEGIN-AKVLKD-------IK------FPIDFDAFELCTPELQNKLCPMRSKFK-------- 362
            |...:.:| |.||||       |:      |..||:...:.|.:..:  |...::.|        
  Fly   629 YSSDDEMNSATVLKDKMRLEERIRELNLNFFSSDFEGIVVLTTKCLS--CETITRQKQGMLDISV 691

  Fly   363 ----------DLEDKK----MEVDVVKRNEPNEEK-------------KDVKYEQF--------- 391
                      ||:||.    ....:.|.....|.|             :.:.||..         
  Fly   692 PVPISGYDNADLQDKPSTYIQNSCITKEYFRGENKYSCNQCTGYTEAIRSISYEVLPRLLVIQLN 756

  Fly   392 WFDD-----------------------DLGSNNSGY-YTLQAVLTHKGRSSSSGHYVAW 426
            .|..                       :||..|..: |.|.:|:||.|.:.:.|||:|:
  Fly   757 RFSGGMEKVSTYVPTTFTLPCFCATCCELGEGNKLHVYKLYSVITHVGATLTVGHYIAY 815

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp14NP_609377.1 Ubl_USP14_like 4..75 CDD:340521
Peptidase_C19A 105..467 CDD:239122 90/514 (18%)
Usp1NP_651687.3 Peptidase_C19 308..819 CDD:470612 90/514 (18%)
Blue background indicates that the domain is not in the aligned region.

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