DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp14 and Ublcp1

DIOPT Version :10

Sequence 1:NP_609377.1 Gene:Usp14 / 34387 FlyBaseID:FBgn0032216 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_651118.1 Gene:Ublcp1 / 42726 FlyBaseID:FBgn0027526 Length:320 Species:Drosophila melanogaster


Alignment Length:104 Identity:30/104 - (28%)
Similarity:54/104 - (51%) Gaps:17/104 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VKVKW-GRELYTDIVVNTDEEPI-LFKAQLFALTGVQPDRQKVM---CKGGILKDDQ--WNLQIK 63
            |.||| |:|...|:   ||::.: :.:.::|..|.|:|:|||::   .||....|:.  ..|::|
  Fly     8 VIVKWSGKEYPVDL---TDQDTVEVLRHEIFRKTQVRPERQKLLNLKYKGKTAADNVKISALELK 69

  Fly    64 DGAVVLLLGSKE-------SVPEVPATPVKFIEDMNEAE 95
            ....::::||.|       |:|:.....|...:|.:|.|
  Fly    70 PNFKLMMVGSTEADIEDACSLPDNIGEVVDDFDDADERE 108

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp14NP_609377.1 Ubl_USP14_like 4..75 CDD:340521 23/75 (31%)
Peptidase_C19A 105..467 CDD:239122
Ublcp1NP_651118.1 Ubl_UBLCP1 12..79 CDD:340511 18/69 (26%)
HAD_IIID1 120..314 CDD:131299
Blue background indicates that the domain is not in the aligned region.

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